Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00285 ATGATCAGGGATGATCTTTCTGCAGTTGCAACACTTACTGTTCCTGATGGCCATGTTTGGCGTGTGGGGTTGAGGAAAGCTGATAATAAGTTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCGATAAGGGTCGGGTTTTTGTTAGTATTCAGATATGAGGGAAACTCATCATTCTGTATTTTTATCTTTAATCTTAATACATCTGAGATAAACTACCAATCTGCTGCTCTCGGTGGTAATCAAAGGAACAATTACAGCATTCAAAACCGAATCTTTGAAGAAATGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGCCTTTGAACTCGGGTTTTTTACGAAACAAGCTATTTGGTGATGAATGGAATCTGCACCAATCAAAATCTGCAAGTACGTTGCAATCCAAATATTTACCTACTCGAGATATCGGGGTTCAGTTTAGTGCTGTGGAGGTTAAAAAGTCTGCAGATGAGGTGAGATTCCAGAATTTGGGTGATGATGCACACAGAATTAAAAAAAGTGGAGGCAAGAAGCGGAAACTTGATTCTAGCGAGCATCGTCCGTCTGCTCATAGTGAAGATTTCGGTGACAATCGCTTTAGATTTTATGAAAGTGCTTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGTTGTCAACGGTGCAAAAGCGTTCGAGCCCGCCAATCCCTTCTGTAGGGTCGTCTTGCGACCATCTTATCTATACAGAGGTTGCATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCAGGATTCATCAAACTTCAGACACCGGATGGGAGACAGTGGCCGGTCCGGTGTCTTTATAAAGTTGGTCGGGCCAAGTTAAGTCAGGGATGGTATGAATTTTGCCTGGAAAATAATTTAGGGGAGGGCGACGTTTGTGTGTTTGAGCTTCTGAGGGTGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATTGAAGACGGTAGACGAATGACAGAGCGCGGGGTTTTGGGTACAAAGAGTTCTCCCAGAAATCAATGGAAATTGAATCAATGGTCTGCTGAAGTTTCCATGGAGAATTCTGTAACAGCCATGGCCGAGTCAAACGAGCAACATGCGGCTCAATCGTTCGATGAACCCTCTCCAGCTAGGAAGGCTGGCCTCTTCTATAAGCTAGTAGTGCCGTCTATTCTTCAAGACAAGAAGCTGAAGTTTGGAGATGATCTTTCTGATTTTGTTACTCTAGTTGTTCCTAATGGTTACCGATGGGTTCTGGAATTAAAAAGACATGGCCGTAGTTTGTGGTTTGAGGATGGCTGGCATGAATTTATCAGACACCATTGCATTCAAGTTGGGCAACTCTTGGTGTTCAGATTTGAAGGAAATTCCGTTTTCAACTTTTACATGTTCAACCTGACTTCTATTTCTAATGGTTCATGCAATACTTCAAATGCTTCCTGTGAACAAAGCCCAATTGCACTTGGAAAAGAAGCTGAATGTGAGAAATTAGTTGAAATATTTGGTTACAGTTCTCCGGACCCTTCGCATTCTTCGGGCAAGAAGGCTTTTTGTGAATCTTCAGAGCAGCAGAAATTCCATGGAAGTTCCAATGAAGCTAGCACTAAGAACTTTACGCATTGGTTTGAAACACAGAACCTGCATCCTCCAAAGGATTTTGATTATACACTCAAAGGTTCAGATAAGTTGCAAGTTCTAAGGTCAAATGGAGATATTGGTATTCAGTTCAATGGAGATGAGCTCGCAAAAGCTAGAGAGAATCTTGACTTTCAATTCTCTAATGAAATAGAAGAAGGAGCCAGGAAAAAGAAGTTAAAAGTTGAACCAAGCGACATCACGCTTCAGGTTTCTAGTGGAAAGCAATGGCGTGTTCGATGTGTTCGTGAAGGTCCTGGCACCAAACTAACCAGGGGATGGGCTAACTTTGTCATGGAGAACGATTTGAAAGAAGAAGATGTTTGTGTTTTTGAACTGCTTGATATAAAAGACATTGTGCTGAAAGTTACAATATTCCGTGCCCATGACTTTCCAACAAAAACTTGA 2094 41.64 MIRDDLSAVATLTVPDGHVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSASTLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRPSAHSEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRVREIVLKVTMFRVIEDGRRMTERGVLGTKSSPRNQWKLNQWSAEVSMENSVTAMAESNEQHAAQSFDEPSPARKAGLFYKLVVPSILQDKKLKFGDDLSDFVTLVVPNGYRWVLELKRHGRSLWFEDGWHEFIRHHCIQVGQLLVFRFEGNSVFNFYMFNLTSISNGSCNTSNASCEQSPIALGKEAECEKLVEIFGYSSPDPSHSSGKKAFCESSEQQKFHGSSNEASTKNFTHWFETQNLHPPKDFDYTLKGSDKLQVLRSNGDIGIQFNGDELAKARENLDFQFSNEIEEGARKKKLKVEPSDITLQVSSGKQWRVRCVREGPGTKLTRGWANFVMENDLKEEDVCVFELLDIKDIVLKVTIFRAHDFPTKT 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1925584 1934470 - Carg22970-RA Car02g00285 142771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00285 697 MobiDBLite consensus disorder prediction 173 201 - -
Car02g00285 697 ProSiteProfiles B3 DNA-binding domain profile. 629 691 IPR003340 GO:0003677
Car02g00285 697 ProSiteProfiles B3 DNA-binding domain profile. 388 484 IPR003340 GO:0003677
Car02g00285 697 Pfam B3 DNA binding domain 9 66 IPR003340 GO:0003677
Car02g00285 697 Pfam B3 DNA binding domain 244 334 IPR003340 GO:0003677
Car02g00285 697 Pfam B3 DNA binding domain 622 690 IPR003340 GO:0003677
Car02g00285 697 ProSiteProfiles B3 DNA-binding domain profile. 241 336 IPR003340 GO:0003677
Car02g00285 697 ProSiteProfiles B3 DNA-binding domain profile. 1 70 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00285 Car20g00761 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00285 Car-Chr2:1925584 Car20g00761 Car-Chr20:4484941 1.05E-14 dispersed
Car12g00479 Car-Chr12:3018448 Car02g00285 Car-Chr2:1925584 7.62E-09 wgd
Car02g00285 Car-Chr2:1925584 Car20g00760 Car-Chr20:4479909 1.44E-55 wgd
Car02g00285 Car-Chr2:1925584 Car03g00906 Car-Chr3:7156671 1.28E-07 wgd
Car02g00285 Car-Chr2:1925584 Car07g00717 Car-Chr7:3698910 8.17E-06 wgd
Car02g00285 Car-Chr2:1925584 Car09g00166 Car-Chr9:827345 7.08E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2946 PF02362 B3 7.90E-18 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00285 - - csv:101213446 647.506