Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00297 ATGGCTCCAAACACTCCCATTACCCTCTCTTTTCTCTTCATGACTCTTCCATTCTTCTTCTTCGATCAATCTATCTCGACTAACATCGAGCTAAGATATGATTTTTACGACGAGTCGTGCCCTCATTTGCCTATGATAATTCGAGATCATATTTGGGAGGCGGTACAAAATGACACGAGAATTGCTGCATCGCTACTACGGTTGCAGTTCCATGATTGTATTGTAGACGGATGTGATGCATCGGTGCTGCTTGATGATACTAAAGACATGAAAGGTGAGAAAAATGCTCCGGGAAATGTGAAATCGCTACGAGGGTTTGAAGTGATCGATGCCGTAAAAGCAGATGTTGAAGCATATTGTCCCGAGACAGTTTCTTGTGTTGATATATTAGCTCTTGCAACTAGAGAAGCTGTGTATCTGGTCGAAGGGCCATCTTGGGGCCTTCCACTAGGACGTAGAGATGGCTTAAAAGCAAACTTCAAATCCGTTCAAGAACAACTCCCATCTCCGAGGGCATCTCTAGAGAATAACACCGCCAAGTTCACCTCAAAGGGCCTCGATTTAAAGGACCTCGTCGTGCTATCAGGCGCACACACTATCGGCTTCGCTCGTTGCGTGACATTCAAGGTCCGCCTCTTCAACTACAAGGGCTCCGGCCAGCCCGACCCTGACATCAACGCAGCCATGCTCTCGGACTTGCAATCCATGTGCCCCAACAGAAACGACGGCACCAACGCCAATTTGGCCCCTCTGGATGTGGCCACTGTTGACAGGTTCGACAATGAGTACTACACGAACTTGATTAGTGGCGTGGGGCTTTTGGAGTCTGACCATGGTCTAATGGCCGACAGCAACACAGCTCAAATGGTTAGACAATATAGTTTTGATACGAACTTGTTTTATGATGACTTTGCTGAGTCGATGTTTAGGTTGAACATGGTTGGGGTTTTGAGTGGCCGTGACGGGCAGATTCGAAAGAATTGTCACGTTGTTAATGTCGATGATGGGTATTAA 1014 46.84 MAPNTPITLSFLFMTLPFFFFDQSISTNIELRYDFYDESCPHLPMIIRDHIWEAVQNDTRIAASLLRLQFHDCIVDGCDASVLLDDTKDMKGEKNAPGNVKSLRGFEVIDAVKADVEAYCPETVSCVDILALATREAVYLVEGPSWGLPLGRRDGLKANFKSVQEQLPSPRASLENNTAKFTSKGLDLKDLVVLSGAHTIGFARCVTFKVRLFNYKGSGQPDPDINAAMLSDLQSMCPNRNDGTNANLAPLDVATVDRFDNEYYTNLISGVGLLESDHGLMADSNTAQMVRQYSFDTNLFYDDFAESMFRLNMVGVLSGRDGQIRKNCHVVNVDDGY 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1998684 2000740 + Carg22982-RA Car02g00297 142783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00297 337 Pfam Peroxidase 48 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00297 337 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Car02g00297 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Car02g00297 337 ProSiteProfiles Plant heme peroxidase family profile. 30 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00297 Car-Chr2:1998684 Car03g00891 Car-Chr3:7086082 8.47E-128 dispersed
Car02g00297 Car-Chr2:1998684 Car02g00312 Car-Chr2:2126533 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00297 K00430 - csv:101209504 533.872