Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00306 ATGGCTACTTCCTCGCATGTGTTTTCATTGTCATGTCGTCTCCTTTTCGTTGTCGTTCTTCTTCTTTACTTCCTTGTTGGCTCTATCGACTCGGTTTCTTTCAAAATCGATCGGTTTAAAACCAATGAAACTGATACTCTTTACCAAGGAGATGCTATGCCATCGGTTGGAGCAGTTGAATTCAACGATGTTGAGTATCTTTGTCATGTTGGTTGGGCTATCTATAAAGACACTGTCCCAATTTGGGACTCAAAAACAGGACAAGCCACTGATTTCTCCACCCATTTTAGCTTCATCATTGATACTCGTAGTTCGCCAAAGTATGGCCACGGGATAGCTTTCTTTTTAGCTCCACCAGGGTTTCAAATCCCTCCAAACTCAGTTGGTGGGTTTCTTGGCCTTTACAACACCACATATAGTGATTCAACCCTCAACCAAATTGTTCATGTTGAATTTGATTCTTTCTCCAATGAAGAATGGGATCCTCCATATGAACATGTGGGTATCAACGTTAACTCCATTCATTCTTCCAACTCCACGCGTTGGAATGCTAGTTTACATAGTGGGGATATGGCTGATGTGTGGATCTCCTACAATTCAACCACCAAGAACTTGAGCGTGTCGTGGAAATACCAAAATTCTTCGTCTACTTCCTTTGAAAATACCACCTTGAGCTACCATATTGATCTTACGAAGGTTCTTCCTCAATGGGCTACCGTGGGGTTTTCAGCTGCAACGGGCACGAATGTAGAGAGACACACATTATTCTCTTGGGAGTTCAATTCAAGCTTGGATTTAGAGCAAGAAAGTGATGATAATGGGAATAAAGTCGATATAATTGTCGGTGTAACCGTGTCGATAGGAGTATCAATCATCATGGGAATTGTAGCATTTGTTGTAGTTTGGAGATTGAAACAAAAGAAACGAAAATCATTAGAAGAAAATGGGAACGAGATGAACTTGACATCGATTAACGATGATTTGGAGAGAGGGGCTGGACCGAGACGGTTTTCTCGCAAGCTTCTCGCCATGGCTACCAACAATTTCTCGAACGAAAGGAAATTGGGTGAGGGAGGGTTTGGTGCAGTGTATAGAGGATATATTCCTGATCTTGGTTTGACGATCGCGGTGAAGAAAATCTCGAGGGGTTCGAGACAGGGACGAAAAGAATACATAACGGAGGTGAAGATTATTAGTAGGCTTCGCCATCGGAATTTAGTGCAACTTATTGGTTGGTGTCATGATAAAGGCGAGTTCTTGTTAGTTTATGAGTTCATGCATAATGGTAGCCTTGATTCTCACCTCTTTGGAAGGAAAAGCCCTCTTGTGTGGGGTGTGAGGTATAAAATTGCATTGGGTTTAGCCTCCGCGTTGCTATATCTTCATGAAGAATGGGAGCAATGCGTAGTTCATAGAGATATTAAGTCGAGCAATGTCATGTTGGATTCGAACTTCAATGTCAAGCTTGGAGATTTCGGGTTGGCTCGATTGATGGACCATGAGATGGGTGCGCAGACTACTGGGTTGGTAGGGACTTTGGGGTACTTGGCTCCAGAATACATAGGCACGGGTCGAGCGAGTAAAGAATCAGATGTGTTTAGTTTTGGGGTCGTTGCTTTGGAGATAGCAACGGGAAGGATGTCGAGGAACGCCATGGAAACGGGTTCTCATAAGGGTTTGGTGGAATGGGTTTGGGATCTTTATGGGAGTGGAAAGGTTCTTATGGGTGTGGATAAGAAATTGCAAAGTGATTACGATAGAAAACAAATGGAGTGTTTGATGATTGTCGGACTTTGGAGTGCTTATCCGGACCCTAATCTTAGACCTTCTATACGACAAGTGATTCAAGTTCTTAATTTTGAGACGACAATGCCAAGTCTTCCAGATAAAATGCCGGTTGCTGTGTATCATGCTCCTTCCACATCGATGAGCTCAAATGAGCCTCCAATTACATCAAGTCTTGACATGGGTCGTTGA 1977 43.05 MATSSHVFSLSCRLLFVVVLLLYFLVGSIDSVSFKIDRFKTNETDTLYQGDAMPSVGAVEFNDVEYLCHVGWAIYKDTVPIWDSKTGQATDFSTHFSFIIDTRSSPKYGHGIAFFLAPPGFQIPPNSVGGFLGLYNTTYSDSTLNQIVHVEFDSFSNEEWDPPYEHVGINVNSIHSSNSTRWNASLHSGDMADVWISYNSTTKNLSVSWKYQNSSSTSFENTTLSYHIDLTKVLPQWATVGFSAATGTNVERHTLFSWEFNSSLDLEQESDDNGNKVDIIVGVTVSIGVSIIMGIVAFVVVWRLKQKKRKSLEENGNEMNLTSINDDLERGAGPRRFSRKLLAMATNNFSNERKLGEGGFGAVYRGYIPDLGLTIAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMHNGSLDSHLFGRKSPLVWGVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHEMGAQTTGLVGTLGYLAPEYIGTGRASKESDVFSFGVVALEIATGRMSRNAMETGSHKGLVEWVWDLYGSGKVLMGVDKKLQSDYDRKQMECLMIVGLWSAYPDPNLRPSIRQVIQVLNFETTMPSLPDKMPVAVYHAPSTSMSSNEPPITSSLDMGR 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2079154 2081130 + Carg24051-RA Car02g00306 142792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00306 658 Pfam Legume lectin domain 32 272 IPR001220 GO:0030246
Car02g00306 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Car02g00306 658 Pfam Protein kinase domain 350 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00306 658 MobiDBLite consensus disorder prediction 638 658 - -
Car02g00306 658 ProSitePatterns Protein kinases ATP-binding region signature. 355 379 IPR017441 GO:0005524
Car02g00306 658 ProSiteProfiles Protein kinase domain profile. 349 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00306 Car-Chr2:2079154 Car19g00365 Car-Chr19:5520194 0 dispersed
Car19g00367 Car-Chr19:5531262 Car02g00306 Car-Chr2:2079154 3.15E-24 dispersed
Car02g00306 Car-Chr2:2079154 Car02g00307 Car-Chr2:2084884 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88634 PF00069 Pkinase 7.70E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00306 - - csv:101203101 1090.1