Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00307 ATGGCTACGTCCTCGTATGTGTTTTCGATGTCAAGTCGTCTCCTTTTCGTTGTCGTTCTTCTTCTTTACTTCCTTGCTAGCTCTATTGACTCGGTTTCTTTCAAAATCGATCGGTTTAAAACCAATGAAAGTAATACTCTTTACCAAGGAGATGCTATGCCATCTGTTGGAGCTGTTGAATTCAACAATGTTAAGTATCTTTGCCGCGTTGGTTGGGTTATCTATGAAGACGTTGTCCCAATTTGGGACTCAAAAACAGGGAAAGCCACTGATTTCTCCACCCATTTTAGCTTCATTATTGATACCACAATTGTGAAAAATTATGGCAATGGATTAGCTTTCTTTTTAGCTCCACCAGGTTTTCAAATCCCTCCAAACTCAGCTGGTGGGTTTCTTGGCCTTTACAACACAACAAATAGTGATTCAACCCTCAACCAAATTGTTCACGTTGAATTTGATTCTTTCTCCAATGAAGAATGGGATCCTCCATTTGAACATGTGGGTATCAACGTTAATTCCATTCATTCTTCGAATTCCACGCGTTGGAATGCTAGTTTGCATAGTGGGGATATGGCTGATGTGTGGATCTCCTACAATTCAACCACCAAGAACTTAAGCGTGTCGTGGAAATACCAAAATTCTTCGTCTACTTCCTTTGAAAATACCAACTTGAGCTACCATATTGATCTTACGAAGGTTCTTCCTCAATGGGCTACCGTGGGATTTTCCGCTGCAACGGGCTTGAATGTAGAGAGACACACATTATTCTCTTGGGAGTTCAATTCAAGCTTGGATTTAGAGAAAGGAAGTGAAGATAACGGGAATAAAGTCGATATAATTGTCGGTGTAACCGTGTCGATAGGAGTATCAATCATCATGGGAATTGTAGCATTTGTTGTAATTTGGAGATTGAAACAAAAGAAACGAAAATTAGAAGAAGAAAATGGGAACGAGGTGAACTTGACATCGATTAACGATGATTTGGAGAGAGGAGCTGGACCGAGACGGTTTTCTCGCAAGCTTCTCGCCATGGCTACCAACAATTTCTCGAACGAAAGGAAGTTGGGCGAGGGAGGGTTTGGTGCAGTGTATAGAGGATATATTCCTGATCTTGGTTTGACGATCGCGGTGAAAAAGATCTCGAGGGGTTCGAGACAGGGACGAAAAGAATACATAACGGAGGTGAAGATCATTAGTAGGCTTCGCCATCGGAATTTAGTGCAACTTATTGGTTGGTGTCATGATAAAGGCGAGTTCTTGTTAGTTTATGAGTTCATGCATAATGGTAGCCTTGATTCTCACCTCTTTGGAAGGAAAAGCCCTCTTGTATGGGGTGTGAGGTATAAAATTGCATTGGGTTTAGCCTCCGCGTTGCTATATCTTCATGAAGAATGGGAGCAATGCGTAGTTCATAGAGATATTAAGTCGAGCAATGTCATGTTGGATTCGAACTTCAATGTCAAGCTTGGAGATTTCGGGTTGGCTCGATTGATGGACCATGAGATGGGTGCGCAGACTACTGGGTTGGTAGGGACTTTGGGGTACTTGGCTCCAGAATACATAAGCACAGGTCGAGCGAGTAAAGAATCAGATGTGTTTAGTTTTGGGGTCGTTGCTTTGGAGATAGCAACGGGAAGGATGTCGAGGAACGCCATGGAAACGGGTTCTCATAAGGGTTTGGTGGAATGGGTTTGGGATCTTTATGGGAATGGAAAGGTTCTTATGGGTGTGGATGAAAAATTGCAAAGTGATTACGATAGAAAACAAATGGAGTGTTTGATGATTGTCGGACTTTGGAGTGCTTATCCGGACCCTAATCTTAGACCTTCAATACGACAAGTGATTCAAGCTCTTAATTTTGAGACGACAATGCCAAGTCTTCCGATAAAATGCCAGTTGCTGTGTATTATGCTCCTTCTACATCGATGA 1929 42.2 MATSSYVFSMSSRLLFVVVLLLYFLASSIDSVSFKIDRFKTNESNTLYQGDAMPSVGAVEFNNVKYLCRVGWVIYEDVVPIWDSKTGKATDFSTHFSFIIDTTIVKNYGNGLAFFLAPPGFQIPPNSAGGFLGLYNTTNSDSTLNQIVHVEFDSFSNEEWDPPFEHVGINVNSIHSSNSTRWNASLHSGDMADVWISYNSTTKNLSVSWKYQNSSSTSFENTNLSYHIDLTKVLPQWATVGFSAATGLNVERHTLFSWEFNSSLDLEKGSEDNGNKVDIIVGVTVSIGVSIIMGIVAFVVIWRLKQKKRKLEEENGNEVNLTSINDDLERGAGPRRFSRKLLAMATNNFSNERKLGEGGFGAVYRGYIPDLGLTIAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMHNGSLDSHLFGRKSPLVWGVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHEMGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRNAMETGSHKGLVEWVWDLYGNGKVLMGVDEKLQSDYDRKQMECLMIVGLWSAYPDPNLRPSIRQVIQALNFETTMPSLPIKCQLLCIMLLLHR 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2084884 2086812 - Carg24050-RA Car02g00307 142793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00307 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Car02g00307 642 Pfam Protein kinase domain 350 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00307 642 ProSitePatterns Protein kinases ATP-binding region signature. 355 379 IPR017441 GO:0005524
Car02g00307 642 ProSiteProfiles Protein kinase domain profile. 349 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00307 642 Pfam Legume lectin domain 32 268 IPR001220 GO:0030246
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00307 Car-Chr2:2084884 Car19g00365 Car-Chr19:5520194 0 dispersed
Car16g00767 Car-Chr16:4876472 Car02g00307 Car-Chr2:2084884 1.15E-06 dispersed
Car02g00306 Car-Chr2:2079154 Car02g00307 Car-Chr2:2084884 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88635 PF00069 Pkinase 6.10E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00307 - - csv:101203101 1045.42