Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00324 ATGGACGCTCTCTTTGTCCCCATCACCTTCTCCAAACCTATTCATTCTTTACTCACCCGCACCACCAACGCCGGAGCTCGATCCAGGATCGGACCTGTTTCCTGCTTCTCCCTGCGTTCTTCTGTAATTCGGCTCAAGCGCTTCCGTTGCGCTGCCGATGCCTCCGATCACCGGCACGGCCACCACCACCACCATAGCTGTCAGCACCATTGCGGTGGTGACGGTGATGGAGTGGAGCTGACTGGAGCTCAGAAGGCGTTTGTTCGATTTGCCGAAGCTATTAGGTGGACGGACTTGGCGAATTATTTGAGGGAGCATCTACACTTATGTTGCGGTTCTGCTGCTTTGTTTATCACTGCGGCTGCATGTCCTTATCTGGTGCCTAAACCTGCTGTGAAGCCTCTACAGAATGTTTTCATTGCTGTTGCTTTCCCTTTAGTCGGGGTCTCTGCTTCTCTTGATGCTCTTACTGATATAAGTGGTGGGAAAGTAAACATCCATGTACTAATGGCCCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCTTGGAGGGAGGACTACTTCTTGTGATGTTTAATCTGGCTCATATTGCTGAAGAGTATTTCACAAAGCAATCAATGACTGACGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCCCTTGTTCTGGATATGAATGATGATAACCTTCCTGATACTTCAGATCTGGAGCATCGAAAGGTGCCCGTGCGTGATATTGAAGTGGGCTCATATATCATGGTGGGAGCTGGTGAGTCTGTCCCCGTAGATTGTGAGGTTTATCATGGTTGTGCTACGATCACTGTTGAGCACTTAACAGGAGAAATCAAACCATTGCAAATAAAGGTTGGGCAAAGAGTACCAGGTGGAGCAAGAAATTTGGACGGTAGGATCATAGTGAAGGCTACAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAACTACAGAGGTGGCTTGATGAATTTGGTGAGAATTACAGCAAAGTGGTTGTAGTTTTATCTGTGGCTGTTGCCCTCATTGGACCATTATTATTCAAGTGGCCCTTTATTTGCACACCAGGTTTCAGAGGATCAGTTTATAGAGCGCTTGGGTTCATGGTAGCCGCATCACCATGTGCACTGGCTGCAGCTCCATTGGCATACGCTATTGCAATAAGTTCATGTGCAAGAAAGGGTATACTCCTGAAAGGTGGACATGTGCTTGATGCTATGGCTTCTTGTCACACCGTTGCATTTGATAAAACCGGGACATTGACTACAGGAGGACTTGTATTTAAAGCCATAGAACCCATTTATGGGCATAAGATTGGAGGCGATAATTCACATTTGGCTTCCTGTTGCATACCCAGCTGTGAAAAAGAAGCCCTTGCTGTTGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCTGTTGTAGATCATAGTGTGGGGAAAAACCTTCCTTCTATTTCTGTTGAAAGTTTCGAATATTTCCCTGGAAGAGGTCTCATCGCAACTTTGCATGGCATTAAGTCAGGAATTGGAGGTCCATTGCGGAAAGCATCCCTTGGTTCTGTGGATTTCATCACTTCCTTTTGCAAGTCCGAAAACGAATCAAGGAAGATCAAGGAAGCTGTTCGAGCATCATCATATGGAAGCGAATTTGTTCATGCTGCTCTTTCAGTTGATCAGAAGGTAACACTGATTCACCTCGAGGATCAGCCTCGAGCTGGCGTCTTAGATGCAATAGCAGAACTACAAGATCAGGCAAAACTCCGTGTTATGATGTTAACTGGTGATCATGATTCAAGTGCATGGAAAATTGCAAATGCTGTGGGAATAGATGAAGTTTACTACAGTCTTAAGCCTGAGGATAAACTTGCTCATGTGAAGGAAATTTCGAGGGAGAAGGGTGGTGGTCTGATCATGGTAGGCGAGGGTATAAACGATGCACCTGCACTTGCTGCAGCTACTGTAGGAATAGTTCTTGCCTGTCGTGCAAGCGCGACTGCTACAGCTGTCGCGGATGTCCTTCTTCTTCAAGATAGTATTTCCGGTGTTCCATTCTGTATTGCCAAATCTCGTCAGACGACTGCGCTGGTCAAGCAAAATGTTACCCTTGCCTTGTCGTCTATCCTTTTAGCCTCTCTCCCATCCATTTTGGGGTTTCTTCCCTTGTGGCTAACGGTCCTTCTACACGAGGGTGGTACTCTCCTGGTTTGCCTGAACTCCATTCGTGCTCTAAATCATCCCTCATGGTCATGGAAGCAAGATTTTCAAAATCTGATCCACAACGCCAGATCTAGTCTGCACACCACGCCCGAACCTAGCTCAGGTACCATCCGAACTGCATCATCATAA 2412 46.31 MDALFVPITFSKPIHSLLTRTTNAGARSRIGPVSCFSLRSSVIRLKRFRCAADASDHRHGHHHHHSCQHHCGGDGDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHLCCGSAALFITAAACPYLVPKPAVKPLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFNLAHIAEEYFTKQSMTDVKELKESHPDFALVLDMNDDNLPDTSDLEHRKVPVRDIEVGSYIMVGAGESVPVDCEVYHGCATITVEHLTGEIKPLQIKVGQRVPGGARNLDGRIIVKATKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTPGFRGSVYRALGFMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDNSHLASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKNLPSISVESFEYFPGRGLIATLHGIKSGIGGPLRKASLGSVDFITSFCKSENESRKIKEAVRASSYGSEFVHAALSVDQKVTLIHLEDQPRAGVLDAIAELQDQAKLRVMMLTGDHDSSAWKIANAVGIDEVYYSLKPEDKLAHVKEISREKGGGLIMVGEGINDAPALAAATVGIVLACRASATATAVADVLLLQDSISGVPFCIAKSRQTTALVKQNVTLALSSILLASLPSILGFLPLWLTVLLHEGGTLLVCLNSIRALNHPSWSWKQDFQNLIHNARSSLHTTPEPSSGTIRTASS 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2236015 2246093 + Carg24033-RA Car02g00324 142810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00324 803 Pfam haloacid dehalogenase-like hydrolase 430 674 - -
Car02g00324 803 Pfam E1-E2 ATPase 239 412 - -
Car02g00324 803 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00324 Car-Chr2:2236015 Car02g00342 Car-Chr2:2437636 0 dispersed
Car02g00324 Car-Chr2:2236015 Car10g00363 Car-Chr10:1793084 5.47E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00324 K01534 - csv:101221102 1383.24