Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g00338 | ATGGCGGTGGAGCTTCTCTCAGCCTACACCAACGCCCATCTCTCCGCCGCAATGGACCAAGACTCCGCCGTCCATGAAGCGGCCTCCGGTATCCACACCCTCAAAAAGCTCATCTCATTACTCTCCCACTCCCCCCCTTCTAACCTGGACTCCGATTGCCAAGCCGTTGCTAACGCCGCCGTCTCCCATTTCAAAAAGGCCATTTCTCTCCTCGGCCACTCCCCTCGTACCGGCCACGCTCGATTCCGCCGCGCCCCTTTAGATTCCTCTCAAATTTACAACGCAACCCCCATTCAGCAAATCCCTCCGCCGCCCCTTGAATCTGCCACCACCATTAATTTCTCTCATTCCTCGTTTCCCGCCGCCGACTCTGAAATTAACCTCCAACACCAACCCTCTTCCTCTTCTTTTCAAATCACTGATCTCTCCAGGGTTTCCTCTGTTGTCTCTAAGCCCTCTTCTGGCTCCAAGAGAAAGTGCGGCTCTGAAAATTTGGGCTCTGGGAAGTGCGGCGAATCCTCCGGTGGTCGATGCCATTGCTCCAAGAAGAGCAGAAAAATGAGGTTCAAAAGAGTGGTGAGAGTTCCAGCTATTAGCTCAAAGAACGCTGATATTCCTCCTGATGATTATTCATGGAGGAAGTATGGACAGAAGCCAATAAAGGGTTCTCCATATCCAAGAGGTTACTATAAATGTAGCAGTTTAAGAGGATGCCCTGCTAGAAAACATGTGGAGAGAGCTTCAGATGATCCATCTATGTTAATAGTGACATATGAAGGCGATCATAATCACTCTCAATCAGTGGCAGAGGCCTCAAGTCTCATCCTTGAATCATGGTGA | 840 | 50.36 | MAVELLSAYTNAHLSAAMDQDSAVHEAASGIHTLKKLISLLSHSPPSNLDSDCQAVANAAVSHFKKAISLLGHSPRTGHARFRRAPLDSSQIYNATPIQQIPPPPLESATTINFSHSSFPAADSEINLQHQPSSSSFQITDLSRVSSVVSKPSSGSKRKCGSENLGSGKCGESSGGRCHCSKKSRKMRFKRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSLRGCPARKHVERASDDPSMLIVTYEGDHNHSQSVAEASSLILESW | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2396518 | 2398388 | - | Carg25158-RA | Car02g00338 | 142824 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g00338 | 279 | PANTHER | WRKY TRANSCRIPTION FACTOR 7-RELATED | 17 | 278 | - | - | |
Car02g00338 | 279 | Pfam | WRKY DNA -binding domain | 208 | 264 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car02g00338 | 279 | Pfam | Plant zinc cluster domain | 157 | 204 | IPR018872 | - | |
Car02g00338 | 279 | ProSiteProfiles | WRKY domain profile. | 201 | 267 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car02g00338 | 279 | MobiDBLite | consensus disorder prediction | 148 | 168 | - | - | |
Car02g00338 | 279 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 17 | 278 | IPR044810 | GO:0003700 | |
Car02g00338 | 279 | SUPERFAMILY | WRKY DNA-binding domain | 202 | 266 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Car02g00338 | 279 | SMART | WRKY_cls | 206 | 266 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car02g00338 | 279 | Gene3D | WRKY domain | 191 | 267 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car02g00338 | Car03g00867 | CCT | |
Car02g00338 | Car03g00867 | ECH | |
Car02g00338 | Car20g00828 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00338 | Car-Chr2:2396518 | Car09g00212 | Car-Chr9:1055588 | 2.38E-82 | dispersed | |
Car02g00338 | Car-Chr2:2396518 | Car20g00828 | Car-Chr20:5497044 | 1.23E-178 | wgd | |
Car02g00338 | Car-Chr2:2396518 | Car03g00867 | Car-Chr3:6952711 | 4.41E-105 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2952 | PF03106 | WRKY | 2.40E-26 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g00338 | - | - | bhj:120089490 | 488.804 |