Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00340 ATGAGCTGCCATTGGAGCTGCAGAGTTCTTGCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCAATGTTGTTGTGATGGCTTGAATTCTGATGGAGTTTTCTTGCTTTCCTTTAAGTATGGCGTTTTGGACGACCCTCTTTTTGTGCTTCAGAACTGGAATTACTCCGATGACACGCCGTGTTCTTGGCGGGGTGTCACCTGCGGCAGTGATGGTGCTACGGTTACAGCTTTATCGCTACCGGATTCTCTGCTTATGGGCTCTGTTTCTTCTGATCTGGGTTTGATTCAAAGCCTTCAATTTGTTGATCTTTCGAACAATTCCTTTAATGGGTCTCTCCCTTTGTCTCTGTTCAACAATTCCATGCTTCGGTTTCTTGATTTGTCGGAGAATTTGATTTCCGATGAGGTTCCGGCGGCGGTGAGTCGACTTGGGAATCTGCAAGTTCTTAACCTCTCCGGCAATGCTCTGTTCGGGGAGTTTCCGAGTGATCTTGCGAATTTGGGTAATCTCACGGTTATATCTCTTAAGAACAATTACATTTCCGGGGAACTTCCTGGTCGGTTCGGAACGGTTGAGGTTTTAGATCTGTCTTCTAATTTGATTAATGGGTCTTTGCCGTTCGATTTTGGTGGCGACAGTTTACGTTACTTCAACATCTCGTATAATAGACTTTCCGGCGAAATCCCGCCGGATTTCGCCCACAAAATCCCAGCCAACGCCACGATTGATCTCTCATTCAACAATTTCACCGGTGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAACTCCTTCGCCGGAAACCGCCAACTCTGCGGCGAGATAACGAAAACTGCATGCCCAATTCCTTCGTCGCCGGCGTCTCTCCCACCGGCAATCGCCGCCATGCCAATTGACCCAAGTACCCCAGAAACCACCTCGCCGGAAAAAGAGAGCGGAACAGGGCTAAAATCCTCAACTATAGTCGCGATTGTACTCGGCGACGTCGTCGGATTAGCAATTCTGTGCCTCCTCTTCTTCTATGTCTATCACTTGAAGAAAAAAAACAAAACCGACGAAACCCATTTGAAAAACGAATCCAATTTGGCGAAAGACAGCTGGTCCACATCTTCATCGGAATCCAGAGGATTTTCGCGATGGTCCTGCCTGAGAAAAAAAGAGTATCCAGAAGAGGGAAATTCCGAGCAGGTTAGTATCGGTTCCATCTCCGGCCGCCGCGACACAACGGAGGAGGGCGGAGAAGGGAACAAAAGGGGAACTTTAGTGACAGTAGACGGCGGAGAGAAAGAGCTGGAACTTGAGACACTATTGAAAGCGTCAGCGTACATTCTCGGCGCTACCGGATCGAGCATAACGTACAAGGCAGTGCTGGAGGATGGCACTGCATTTGCAGTGCGGAGAATCGGCGACGGCGGAGTTGAAAAGTATAAGGATTTCGAGAATCAAATTCGAGTTGTAGCTAAATTGGTTCATCCAAATTTGGTTCGTGTTCGTGGGTTCTATTGGGGCGTTGATGAGAAGCTCATCATTTATGAGTTCGTTCCCAATGGTAGCCTTGCCAATGCCCGTCACAGGAAAGTGGGCTCTTCACCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATAGCAAAAGGAGTAGCCCGTGGCCTTGCTTATCTCCATGACAAGAAGCACGTCCATGCCAACTTAAGACCTAGCAACATTCTTTTGGGCTACAATATGGAGCCCAAGATAGGCGACTTCGGTCTCGAGAAGGTTTTATTCGGCGATTCAACTTACAAAACGGGTAGCTCGACTCGAAATTTCGGGAGTAAGAGGTCAACTGCATCTCGTGATAGCTTCCAAGACTTCGTTACTGGACCTAGCCCTGGACCGAGTCCAAGTCCTAGCTCGATCAGTGGAGTGTCACCATACCTAGCACCAGAATCGCTTCGAAGCTTAAAACCTACTCCAAAGTGGGATGTGTACTCTTTTGGAGTGATACTACTCGAGCTACTAACTGGAAAGATCGTTGTATTGGATGAGTTGGGTCAAGGGCTTGAGCTTGCAGTCGACGATAAAAGTCGAGCTTTAAGAATGGCTGACATGGCAATTCGAGTTGACGTGGAGGGGAGAGAAGATGCATTATTATCATTCTTTAAATTAGGTTATACTTGTGCATCTCCAACCCCACAAAAGAGACCTTCCATGAAGGAAGCCCTACAAGTTTTGGAGAAATTTCCAACTATATCCACGTCATCACACTATTATGGTCTCTAG 2265 47.42 MSCHWSCRVLALLLLLLLLLQCCCDGLNSDGVFLLSFKYGVLDDPLFVLQNWNYSDDTPCSWRGVTCGSDGATVTALSLPDSLLMGSVSSDLGLIQSLQFVDLSNNSFNGSLPLSLFNNSMLRFLDLSENLISDEVPAAVSRLGNLQVLNLSGNALFGEFPSDLANLGNLTVISLKNNYISGELPGRFGTVEVLDLSSNLINGSLPFDFGGDSLRYFNISYNRLSGEIPPDFAHKIPANATIDLSFNNFTGEVPVSDVFMNQEANSFAGNRQLCGEITKTACPIPSSPASLPPAIAAMPIDPSTPETTSPEKESGTGLKSSTIVAIVLGDVVGLAILCLLFFYVYHLKKKNKTDETHLKNESNLAKDSWSTSSSESRGFSRWSCLRKKEYPEEGNSEQVSIGSISGRRDTTEEGGEGNKRGTLVTVDGGEKELELETLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRVRGFYWGVDEKLIIYEFVPNGSLANARHRKVGSSPCHLPWEARLRIAKGVARGLAYLHDKKHVHANLRPSNILLGYNMEPKIGDFGLEKVLFGDSTYKTGSSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSPSSISGVSPYLAPESLRSLKPTPKWDVYSFGVILLELLTGKIVVLDELGQGLELAVDDKSRALRMADMAIRVDVEGREDALLSFFKLGYTCASPTPQKRPSMKEALQVLEKFPTISTSSHYYGL 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2407856 2410845 - Carg25156-RA Car02g00340 142826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00340 754 MobiDBLite consensus disorder prediction 302 316 - -
Car02g00340 754 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Car02g00340 754 MobiDBLite consensus disorder prediction 393 423 - -
Car02g00340 754 MobiDBLite consensus disorder prediction 599 637 - -
Car02g00340 754 MobiDBLite consensus disorder prediction 293 316 - -
Car02g00340 754 Pfam Leucine Rich Repeat 213 233 IPR001611 GO:0005515
Car02g00340 754 Pfam Leucine Rich Repeat 145 167 IPR001611 GO:0005515
Car02g00340 754 MobiDBLite consensus disorder prediction 599 623 - -
Car02g00340 754 Pfam Protein kinase domain 446 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00340 754 ProSiteProfiles Protein kinase domain profile. 440 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00340 Car20g00831 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00340 Car-Chr2:2407856 Car04g00445 Car-Chr4:2515623 0 dispersed
Car02g00340 Car-Chr2:2407856 Car20g00831 Car-Chr20:5532013 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88636 PF00069 Pkinase 1.30E-31 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00340 - - bhj:120088533 1212.21