Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00342 ATGGCTTTGTTTGTAGCTGCTGCTGTTTGCCCTTATTTGGTGCCGAAACCATTTGTGAAGCCTTGCCAAAATGCTCTCATTGCCATTGCTTTTCCTTTGGTCGGGGTCTCCTCATCCCTTGATGCTTTAACTGATATTAGTGGAGGAAAAGTAAACATCCATGTACTTATGGCTCTTGCAGCCTTTGCATCCATCTTTATGGGGAACGCCTTGGAAGGAGGGATATTGCTTGGCATGTTTAATTTGTCTCACATTGGTAAGAAATTCAATGCTAGCACAGCTGAATTACCTAGACTTGTTGTCGACCTTAACTTGACAATTTTAATGGTGATTGTAGCGGAAGAGTATTTTATAAGTCGTGCAATGATTGATGTCAAAGAGTTGAAGGAAAGTTATCCAGATTCTGCCCTTGTTTTAGATACAAATGAGGGTAAACTTCCAAATATTGCAGATTTGTCCTACCAGAAGGTGCCTGTCCATGATGTACAAGTGGACTCCTATCTATTGGTTGGTGCTGGTGAGTCTGTTCCTGTAGATTGTGAAGTTTTCCATGGTAGTGCTACAGTCACTATTGAGCACCTAACAGGTGAAATCAAACCTTTGGAGATTACTGTGGGAGACAGAGTTCCTGGTGGTGCAAGAAACTTGGATGGTAGGATAATCGTTAAGGCCACAAAGACCTGGAAAGAGTCGACGTTGAGCCGGATAGTGAACTTGACTGAAGAGGCACAACTGAATAAACCAAGACTTCAGAGGTGGCTGGATGAATTTGGCGAGCATTATAGCAAAGCAGTTGTGGTTTTGTCCATTGCTGTTGCGCTTGTTGGTCCAATGTTATTCAAGTGGCCATTTATTGGTACATCAGCTTGTAGAGGATCGGTTTACAGAGCTCTAGGCCTCATGGTAGCAGCATCACCTTGTGCTTTGGCCGTTGCACCATTGGCTTATGCTATTGCAATTAATGCTTTATCTTCTTGTCACACTATAGCATTTGATAAAACTGGGACGTTGACTACTGGAAGCCTTATTTTCAAAGCAATTGAACCAATTTACGGACATCAGGTCAGAGAAAACAAATCAGACTCTGGTTCCTGTTGCATTCCCTGCTGTGAAGAAGAAGCACTTGCTGTAGCAGCTGCAATGGAGAAGGGTACTACCCACCCTATAGGAAGAGCTGTGGTTGACCATAGTTTGGGAAAAGACCTCCCTTCCTTTTCTGTCCAAAATTTGGAATATTTTCCGGGTAGAGGACTCGTTGCAATGCTGCAAGGTATTGAGTCAGGAACTGAAGGTGGGAAACTATTGAAAGCATCTCTGGGTTCCTTGGATTTCATCACGTCACTCTACAAATCAGATACCAAATCAAAAAAGATCAAAGAAGCTGCAAGCACGTCTTCGTATGGAAGTGAATTTGTTCATGCTGCTCTTGCAGTTGATGGGAAGGTTACACTTATTCATCTTGAGGATCGACCTCATCCTGGAGTTTCAAGTATAATTGCAGAATTAACGGATATAGCGAAACTTCATGTTATGATGTTGACCGGAGATCATGAATCAAGTGCAAGGAGAGTGGCAAAAGCAGTGGGCATCAAGGAAGTCTACTTCAGTCTAAAACCTGAAGATAAGCTTAGTCACGTGAAAAGTATCTCTAGGGAGCATGGAGGAGGGCTAATCATGGTTGGTGAAGGCATTAATGATGCACCAGCTCTTGCTGCTGCCACCGTGGGAATAGTGCTCGCTCAGCGTGCTAGTGCAACTGCTATAGCTGTGGCAGATGTTCTGTTGCTGCGGGATAACATTTCTGGTGTACCATTCTGCATCTCCAAGTCTCGTCAGACGACTGCCCTAGTACTTCTGCATGAAGGTGGTACTCTTCTCGTTTGCCTCAACTCCATACGCGCTCTGAATAATCCCAGTTGGTCCTGGAGGCAGGATTTAAGTCAATTGCTACTGAAGCTCAAATTTAGGGGCTCGCAGCCAAGCCTTGATACCATCTCTACCACTGTACACTCTTCCCCTGTATAG 2025 44.1 MALFVAAAVCPYLVPKPFVKPCQNALIAIAFPLVGVSSSLDALTDISGGKVNIHVLMALAAFASIFMGNALEGGILLGMFNLSHIGKKFNASTAELPRLVVDLNLTILMVIVAEEYFISRAMIDVKELKESYPDSALVLDTNEGKLPNIADLSYQKVPVHDVQVDSYLLVGAGESVPVDCEVFHGSATVTIEHLTGEIKPLEITVGDRVPGGARNLDGRIIVKATKTWKESTLSRIVNLTEEAQLNKPRLQRWLDEFGEHYSKAVVVLSIAVALVGPMLFKWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAYAIAINALSSCHTIAFDKTGTLTTGSLIFKAIEPIYGHQVRENKSDSGSCCIPCCEEEALAVAAAMEKGTTHPIGRAVVDHSLGKDLPSFSVQNLEYFPGRGLVAMLQGIESGTEGGKLLKASLGSLDFITSLYKSDTKSKKIKEAASTSSYGSEFVHAALAVDGKVTLIHLEDRPHPGVSSIIAELTDIAKLHVMMLTGDHESSARRVAKAVGIKEVYFSLKPEDKLSHVKSISREHGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRDNISGVPFCISKSRQTTALVLLHEGGTLLVCLNSIRALNNPSWSWRQDLSQLLLKLKFRGSQPSLDTISTTVHSSPV 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2437636 2449123 - Carg25154-RA Car02g00342 142828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00342 674 Pfam E1-E2 ATPase 150 324 - -
Car02g00342 674 Pfam haloacid dehalogenase-like hydrolase 328 573 - -
Car02g00342 674 ProSitePatterns E1-E2 ATPases phosphorylation site. 332 338 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00324 Car-Chr2:2236015 Car02g00342 Car-Chr2:2437636 0 dispersed
Car02g00342 Car-Chr2:2437636 Car05g00660 Car-Chr5:4109701 2.19E-40 dispersed
Car02g00342 Car-Chr2:2437636 Car10g00363 Car-Chr10:1793084 1.12E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00342 K01534 - jre:109009121 954.51