Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00345 GGTTTTCCGACACCCATTTCGTTTTCTTGGACAATCATGCATCCTGATGATCATCCGCAGCAGCGGTTGTTAGAGGAGGAAGAGGAAGAAACTGCTTATGACTTAACGGAGAAGGTTGTGGTAATTGGGATCGACGAAGTGGAGTCTGATTCCGATGTGGGTATGCTGCCGTTTTCATGGAGGAAGCTCTGGCTGTTCACTGGGCCGGGGTTTTTGATGAGCATAGCGTTTTTAGACCCTGGGAATTTGGAGTCCAATCTTCAGGCAGGTGCGATTGGAGGGTATTCTTTATTGTGGCTTCTGTTTTGGGCTACGGCCATGGGGCTTTTGATTCAGTTGCTTTCTGCCAGGCTTGGCGTTGCCACTGGTAAGCACTTGGCCGAGCTGTGTAGAGAAGAGTACCCAACTTGGGCAAGAATTGTGCTGTGGGTTATGGCGGAATTGGCCCTTATTGGTGCGGATATACAGGAAGTTATAGGGAGTGCTATTGCTATTAAGATTCTGAGTAATGGAGCTTTGCCTCTTTGGGCTGGAGTCATCATCACTGCTTTAGATTGTTTTATCTTCCTGTTTCTTGAGAATTATGGTGTGAGGAAATTGGAGGCTGTTTTTGCTGTTCTTATTGCTACTATGGCTATCGCATTTGCTTGGATGTTTGGTGAAACGAAACCAAATGGGAAAGAGCTTCTATTGGGTATTTTGATTCCCAAACTTAGCTCCAAGACAATTAAACAAGCTGTTGCAGTTGTGGGCTGTGTCATTATGCCACACAATGTGTTTCTGCACTCAGCTCTTGTGCAATCTCGAGACGTCGATTCGACGAAGAAGGGACGGGTCCGAGAAGCTCTCAGATACTACTCCATTGAGTCCACTCTTGCACTTTTTGTTTCCTTCATCATCAACTTGTTTGTTACAACTGTGTTTGCTAAAGCTTTCTATGGCACAGACATGGCGAATAGCATCGGTCTCATAAACGCAGGCGAATATCTTCAAGATAAATATGGTGGAGGACTTCTCCCTATTCTGTATATCTGGGCTATTGGTTTGTTAGCTGCTGGCCAAAGTAGCACCATTACTGGTACATATGCAGGACAGTTTATAATGGGAGGCTTCCTTAACTTGAAGTTGAAAAAATGGCTTAGAGCTTTGATAACTCGGAGCTTTGCAATTGTACCGACTATAATTGTTGCTCTCGTGTTCGAAACCTCCGACGGGATGGTCGATATTCTTAACGAATGGCTCAATGTCCTCCAGTCAATTCAGATCCCCTTTGCTCTGATTCCTCTTCTCTGTTTGGTTTCTAAGGAACATCTAATGGGCACTTTCAGAATTGGCCCCGTTTTAAAGATGTTCTCATGGCTGGTGGCAGTGTTGGTGATGGCCATTAATGGGTATCTTTTGGTGAGTTTCATCTCATCAGAAGTGAATGGACTGCTGATAGCCATTTTCGTGTTTGTCTTCATTGCTGCATATGTTGCCTTTGTTGTTTACCTCGTCTATCAAAGTATTTCCTTTTCAAGTTGGAACAACATTAACTGGAAGGCCTCCACGGTCGACGAAAACTGA 1566 44.57 GFPTPISFSWTIMHPDDHPQQRLLEEEEEETAYDLTEKVVVIGIDEVESDSDVGMLPFSWRKLWLFTGPGFLMSIAFLDPGNLESNLQAGAIGGYSLLWLLFWATAMGLLIQLLSARLGVATGKHLAELCREEYPTWARIVLWVMAELALIGADIQEVIGSAIAIKILSNGALPLWAGVIITALDCFIFLFLENYGVRKLEAVFAVLIATMAIAFAWMFGETKPNGKELLLGILIPKLSSKTIKQAVAVVGCVIMPHNVFLHSALVQSRDVDSTKKGRVREALRYYSIESTLALFVSFIINLFVTTVFAKAFYGTDMANSIGLINAGEYLQDKYGGGLLPILYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNLKLKKWLRALITRSFAIVPTIIVALVFETSDGMVDILNEWLNVLQSIQIPFALIPLLCLVSKEHLMGTFRIGPVLKMFSWLVAVLVMAINGYLLVSFISSEVNGLLIAIFVFVFIAAYVAFVVYLVYQSISFSSWNNINWKASTVDEN 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2494704 2497764 + Carg25151-RA Car02g00345 142831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00345 521 Hamap Divalent metal cation transporter MntH [mntH]. 49 471 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car02g00345 521 Pfam Natural resistance-associated macrophage protein 84 445 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00345 Car20g00837 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00160 Car-Chr1:809697 Car02g00345 Car-Chr2:2494704 8.20E-107 dispersed
Car02g00345 Car-Chr2:2494704 Car14g00955 Car-Chr14:5785491 1.15E-106 dispersed
Car02g00345 Car-Chr2:2494704 Car20g00837 Car-Chr20:5675502 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00345 K21398 - csv:101211711 875.93