Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g00348 | ATGGGGGTCTCATTACTTAAATTGCTTCTTAGACATATTTCATCATTTTTTCAACTTTCGTCTTCTGACTACATAAATTTACAACCGACTCTGAAGTACTACCATAAAATAGAAGGGGTTTTCAAACTTTTGAAGCCGATACTGGATGCAGTTGTTGATTCAGATATAGCTTCTGATGAAGAACTTATTAAGGCATTTGAAGAACTTGACCATTCAGTTGATGAACTAAGGGTGCTGTTTGAAAATTGGCAACCATTGTCGAGTAAAGTATACTTGGTACTGCAAAGTGAAGCATTAATAACAAAGATTGGGAAATCTAGCTTGGATATATTCCAGCTTCTTCGGTCTTCAAATGAAAATCTTCCTGAGGAATTAAGTTCATCATCTCTTGAGCACTGCGTCCAAAAGATTAAGCATATTGGACGGGAAGAAATATCTTCTGTTATTAAAGATGCCATAAGGAATCAAGCAGAGGGCATTGCACCCCCCAGCTCAGATGTTTTGGTGAAACTTGCAGATTCCCTGAGCTTGAGATCAAACCAGGAGATCTTAATTGAGGCTGTGGCCCTTGAAAAGTTGAAAGAGAGTGCCGAACAAGCTGAACAAACCGGAGAAGCTGAGGACATCGATCAAATGGTTGCTCTTGTAACCCGTATGCATGAACGACTTCTTACGATAAAGCAATCCCAAAGTTCGGGTCCTGTATCGATACCTACTGATTTCTGCTGCCCTCTTTCTCTCGAACTAATGACAGATCCAGTTATTGTAGCATCAGGGCAGACCTATGAACGGGTTTTTATAAAAAATTGGATCGATATGGGGCTCAATGTTTGTCCAAAGACTAGACAGACGTTGGTTCACACGAATCTTATACCTAACTACACTGTTAAGGCTCTGATTGCAAACTGGTGTGAGACAAATAATGTGAAGTTATCTGACCCCTCAAGGTCGGTGCTCGGTAGCTTCGAGTCTGATACCCATCGAGAACCCCTTTTTTCTCATTCCCCTCAGTCAGCCCGGTCTGTACTTGGTGGAACCCATCGAGATGGAAGTTCTTCTTTGCTCTCCCACTCTTTCTCTGAGGATTCCTTGTCCAATGATGCTGGAGATGAAAGAGGGATTGATGTTAGTAGGCTATTGCTTACAAGTACGGAAGATCAATCGGCCAAATTGGAAGAAAATGGTGGTGATTTGATTGCTAAACCATCAATGTCACCATCTAGAACCAATGTTCCAAATTCCAGTGAGGATGAGTCACATAGTCATAATAGGAAGGCCTCCACCTCGAGTGCAGTCTCAAATGCTAATCTCTCTCGAGGAACCTCAGGGGAAGCCAATGAATCTCCAAACGTGTCAACAAATCTGACAGGTTATGGCAGTGATGCTGCTGGGGAGAGTAAATCAGAGCCCTTGGCTGCTGCTTCCTCAACTCCCAATCACATAGAACCAGAGCTTCCACCCAGATTAGCTGACTCAAGATCTCGAGGTAATATGATGTGGCTCCGACCATCAGAGAGGTTTGCCAGTAAAATAACTACACCATCTGCTAACGAAACAAGGCCAGATATTTCAGCTATCGAAGCACAAGTTCGGAAGGTGGTGGAGGAATTGAAGAGCAGTTCACTTGAAACTTTAAGAGGTGCTACGGCTGAATTGCGGCTACTGGCCAAACATAATATGGATAACCGGATAGTGATTGCTCAATGTGGAGCCATTGAATATTTGGTTAATTTGCTTCTCTCTGCAGACTCGAAGATCCAGGAGAATGCTGTGACTGCTCTTCTAAACTTATCCATCAATGATAATAACAAAAATGCCATTGCTCAGGCAAATGCAATTGAACCTTTGATTCATGTTCTTAAAACTGGGAGTCCGGAGGCAAAGGAGAACTCAGCAGCAACACTTTTTAGCCTCTCAGTGATTGAAGAGAACAAGGTGAAAATTGGAAGGTCTGGAGCAATTGGACCTCTGGTTGAATTGCTGGGTATTGGAACTCCAAGGGGAAAGAAGGATGCAGCTACAGCTTTGTTTAACTTATCAATATTCCATGAAAACAAGGCTAGAATTGTTCAAGCTGGAGCCGTGAGGCATCTTGTGGAGTTGATGGACCCAGCAGCTGGAATGGTTGACAAGGCAGTTGCTGTGTTGGCAAATCTCGCCACAATTCCCGAGGGAAGGTCTGCAATTGGTCAGGAAGGTGGAATTCCCGTTCTCGTCGAGGTCGTGGAGTTGGGTTCTGCTCGAGGAAAGGAAAATGCAGCAGCAGCATTGTTGCAGCTTTGCACAACCAGCAGTAGGCATTGCAGTATGGTGCTCCAAGAAGGAGCTGTGCCACCATTAGTGGCATTGTCCCAATCTGGTACTGCTAGAGCCAAAGAAAAGGCTCAAGCGCTTCTAAGCCATTTCAGAAGCCAGAGACATGGAAATTCAGGAAGAGGGTAA | 2442 | 43.86 | MGVSLLKLLLRHISSFFQLSSSDYINLQPTLKYYHKIEGVFKLLKPILDAVVDSDIASDEELIKAFEELDHSVDELRVLFENWQPLSSKVYLVLQSEALITKIGKSSLDIFQLLRSSNENLPEELSSSSLEHCVQKIKHIGREEISSVIKDAIRNQAEGIAPPSSDVLVKLADSLSLRSNQEILIEAVALEKLKESAEQAEQTGEAEDIDQMVALVTRMHERLLTIKQSQSSGPVSIPTDFCCPLSLELMTDPVIVASGQTYERVFIKNWIDMGLNVCPKTRQTLVHTNLIPNYTVKALIANWCETNNVKLSDPSRSVLGSFESDTHREPLFSHSPQSARSVLGGTHRDGSSSLLSHSFSEDSLSNDAGDERGIDVSRLLLTSTEDQSAKLEENGGDLIAKPSMSPSRTNVPNSSEDESHSHNRKASTSSAVSNANLSRGTSGEANESPNVSTNLTGYGSDAAGESKSEPLAAASSTPNHIEPELPPRLADSRSRGNMMWLRPSERFASKITTPSANETRPDISAIEAQVRKVVEELKSSSLETLRGATAELRLLAKHNMDNRIVIAQCGAIEYLVNLLLSADSKIQENAVTALLNLSINDNNKNAIAQANAIEPLIHVLKTGSPEAKENSAATLFSLSVIEENKVKIGRSGAIGPLVELLGIGTPRGKKDAATALFNLSIFHENKARIVQAGAVRHLVELMDPAAGMVDKAVAVLANLATIPEGRSAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTTSSRHCSMVLQEGAVPPLVALSQSGTARAKEKAQALLSHFRSQRHGNSGRG | 813 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2520764 | 2527196 | + | Carg25148-RA | Car02g00348 | 142834 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g00348 | 813 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 652 | 694 | IPR000225 | GO:0005515 | |
Car02g00348 | 813 | MobiDBLite | consensus disorder prediction | 327 | 370 | - | - | |
Car02g00348 | 813 | ProSiteProfiles | U-box domain profile. | 236 | 310 | IPR003613 | GO:0004842|GO:0016567 | |
Car02g00348 | 813 | Pfam | U-box domain | 237 | 307 | IPR003613 | GO:0004842|GO:0016567 | |
Car02g00348 | 813 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 693 | 734 | IPR000225 | GO:0005515 | |
Car02g00348 | 813 | MobiDBLite | consensus disorder prediction | 331 | 363 | - | - | |
Car02g00348 | 813 | MobiDBLite | consensus disorder prediction | 385 | 495 | - | - | |
Car02g00348 | 813 | MobiDBLite | consensus disorder prediction | 425 | 461 | - | - | |
Car02g00348 | 813 | Coils | Coil | 180 | 210 | - | - | |
Car02g00348 | 813 | Pfam | Armadillo/beta-catenin-like repeat | 600 | 639 | IPR000225 | GO:0005515 | |
Car02g00348 | 813 | Pfam | Armadillo/beta-catenin-like repeat | 643 | 680 | IPR000225 | GO:0005515 | |
Car02g00348 | 813 | Pfam | Armadillo/beta-catenin-like repeat | 561 | 598 | IPR000225 | GO:0005515 | |
Car02g00348 | 813 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 570 | 612 | IPR000225 | GO:0005515 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car02g00348 | Car20g00844 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00348 | Car-Chr2:2520764 | Car08g00264 | Car-Chr8:1657275 | 2.40E-63 | dispersed | |
Car04g01263 | Car-Chr4:7325666 | Car02g00348 | Car-Chr2:2520764 | 6.48E-17 | dispersed | |
Car04g02218 | Car-Chr4:18019142 | Car02g00348 | Car-Chr2:2520764 | 8.69E-31 | dispersed | |
Car15g00688 | Car-Chr15:3824161 | Car02g00348 | Car-Chr2:2520764 | 2.20E-33 | dispersed | |
Car07g00597 | Car-Chr7:3024887 | Car02g00348 | Car-Chr2:2520764 | 1.61E-06 | transposed | |
Car02g00348 | Car-Chr2:2520764 | Car20g00844 | Car-Chr20:5912330 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g00348 | - | - | csv:101212423 | 1332.01 |