Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00348 ATGGGGGTCTCATTACTTAAATTGCTTCTTAGACATATTTCATCATTTTTTCAACTTTCGTCTTCTGACTACATAAATTTACAACCGACTCTGAAGTACTACCATAAAATAGAAGGGGTTTTCAAACTTTTGAAGCCGATACTGGATGCAGTTGTTGATTCAGATATAGCTTCTGATGAAGAACTTATTAAGGCATTTGAAGAACTTGACCATTCAGTTGATGAACTAAGGGTGCTGTTTGAAAATTGGCAACCATTGTCGAGTAAAGTATACTTGGTACTGCAAAGTGAAGCATTAATAACAAAGATTGGGAAATCTAGCTTGGATATATTCCAGCTTCTTCGGTCTTCAAATGAAAATCTTCCTGAGGAATTAAGTTCATCATCTCTTGAGCACTGCGTCCAAAAGATTAAGCATATTGGACGGGAAGAAATATCTTCTGTTATTAAAGATGCCATAAGGAATCAAGCAGAGGGCATTGCACCCCCCAGCTCAGATGTTTTGGTGAAACTTGCAGATTCCCTGAGCTTGAGATCAAACCAGGAGATCTTAATTGAGGCTGTGGCCCTTGAAAAGTTGAAAGAGAGTGCCGAACAAGCTGAACAAACCGGAGAAGCTGAGGACATCGATCAAATGGTTGCTCTTGTAACCCGTATGCATGAACGACTTCTTACGATAAAGCAATCCCAAAGTTCGGGTCCTGTATCGATACCTACTGATTTCTGCTGCCCTCTTTCTCTCGAACTAATGACAGATCCAGTTATTGTAGCATCAGGGCAGACCTATGAACGGGTTTTTATAAAAAATTGGATCGATATGGGGCTCAATGTTTGTCCAAAGACTAGACAGACGTTGGTTCACACGAATCTTATACCTAACTACACTGTTAAGGCTCTGATTGCAAACTGGTGTGAGACAAATAATGTGAAGTTATCTGACCCCTCAAGGTCGGTGCTCGGTAGCTTCGAGTCTGATACCCATCGAGAACCCCTTTTTTCTCATTCCCCTCAGTCAGCCCGGTCTGTACTTGGTGGAACCCATCGAGATGGAAGTTCTTCTTTGCTCTCCCACTCTTTCTCTGAGGATTCCTTGTCCAATGATGCTGGAGATGAAAGAGGGATTGATGTTAGTAGGCTATTGCTTACAAGTACGGAAGATCAATCGGCCAAATTGGAAGAAAATGGTGGTGATTTGATTGCTAAACCATCAATGTCACCATCTAGAACCAATGTTCCAAATTCCAGTGAGGATGAGTCACATAGTCATAATAGGAAGGCCTCCACCTCGAGTGCAGTCTCAAATGCTAATCTCTCTCGAGGAACCTCAGGGGAAGCCAATGAATCTCCAAACGTGTCAACAAATCTGACAGGTTATGGCAGTGATGCTGCTGGGGAGAGTAAATCAGAGCCCTTGGCTGCTGCTTCCTCAACTCCCAATCACATAGAACCAGAGCTTCCACCCAGATTAGCTGACTCAAGATCTCGAGGTAATATGATGTGGCTCCGACCATCAGAGAGGTTTGCCAGTAAAATAACTACACCATCTGCTAACGAAACAAGGCCAGATATTTCAGCTATCGAAGCACAAGTTCGGAAGGTGGTGGAGGAATTGAAGAGCAGTTCACTTGAAACTTTAAGAGGTGCTACGGCTGAATTGCGGCTACTGGCCAAACATAATATGGATAACCGGATAGTGATTGCTCAATGTGGAGCCATTGAATATTTGGTTAATTTGCTTCTCTCTGCAGACTCGAAGATCCAGGAGAATGCTGTGACTGCTCTTCTAAACTTATCCATCAATGATAATAACAAAAATGCCATTGCTCAGGCAAATGCAATTGAACCTTTGATTCATGTTCTTAAAACTGGGAGTCCGGAGGCAAAGGAGAACTCAGCAGCAACACTTTTTAGCCTCTCAGTGATTGAAGAGAACAAGGTGAAAATTGGAAGGTCTGGAGCAATTGGACCTCTGGTTGAATTGCTGGGTATTGGAACTCCAAGGGGAAAGAAGGATGCAGCTACAGCTTTGTTTAACTTATCAATATTCCATGAAAACAAGGCTAGAATTGTTCAAGCTGGAGCCGTGAGGCATCTTGTGGAGTTGATGGACCCAGCAGCTGGAATGGTTGACAAGGCAGTTGCTGTGTTGGCAAATCTCGCCACAATTCCCGAGGGAAGGTCTGCAATTGGTCAGGAAGGTGGAATTCCCGTTCTCGTCGAGGTCGTGGAGTTGGGTTCTGCTCGAGGAAAGGAAAATGCAGCAGCAGCATTGTTGCAGCTTTGCACAACCAGCAGTAGGCATTGCAGTATGGTGCTCCAAGAAGGAGCTGTGCCACCATTAGTGGCATTGTCCCAATCTGGTACTGCTAGAGCCAAAGAAAAGGCTCAAGCGCTTCTAAGCCATTTCAGAAGCCAGAGACATGGAAATTCAGGAAGAGGGTAA 2442 43.86 MGVSLLKLLLRHISSFFQLSSSDYINLQPTLKYYHKIEGVFKLLKPILDAVVDSDIASDEELIKAFEELDHSVDELRVLFENWQPLSSKVYLVLQSEALITKIGKSSLDIFQLLRSSNENLPEELSSSSLEHCVQKIKHIGREEISSVIKDAIRNQAEGIAPPSSDVLVKLADSLSLRSNQEILIEAVALEKLKESAEQAEQTGEAEDIDQMVALVTRMHERLLTIKQSQSSGPVSIPTDFCCPLSLELMTDPVIVASGQTYERVFIKNWIDMGLNVCPKTRQTLVHTNLIPNYTVKALIANWCETNNVKLSDPSRSVLGSFESDTHREPLFSHSPQSARSVLGGTHRDGSSSLLSHSFSEDSLSNDAGDERGIDVSRLLLTSTEDQSAKLEENGGDLIAKPSMSPSRTNVPNSSEDESHSHNRKASTSSAVSNANLSRGTSGEANESPNVSTNLTGYGSDAAGESKSEPLAAASSTPNHIEPELPPRLADSRSRGNMMWLRPSERFASKITTPSANETRPDISAIEAQVRKVVEELKSSSLETLRGATAELRLLAKHNMDNRIVIAQCGAIEYLVNLLLSADSKIQENAVTALLNLSINDNNKNAIAQANAIEPLIHVLKTGSPEAKENSAATLFSLSVIEENKVKIGRSGAIGPLVELLGIGTPRGKKDAATALFNLSIFHENKARIVQAGAVRHLVELMDPAAGMVDKAVAVLANLATIPEGRSAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTTSSRHCSMVLQEGAVPPLVALSQSGTARAKEKAQALLSHFRSQRHGNSGRG 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2520764 2527196 + Carg25148-RA Car02g00348 142834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00348 813 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 652 694 IPR000225 GO:0005515
Car02g00348 813 MobiDBLite consensus disorder prediction 327 370 - -
Car02g00348 813 ProSiteProfiles U-box domain profile. 236 310 IPR003613 GO:0004842|GO:0016567
Car02g00348 813 Pfam U-box domain 237 307 IPR003613 GO:0004842|GO:0016567
Car02g00348 813 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 693 734 IPR000225 GO:0005515
Car02g00348 813 MobiDBLite consensus disorder prediction 331 363 - -
Car02g00348 813 MobiDBLite consensus disorder prediction 385 495 - -
Car02g00348 813 MobiDBLite consensus disorder prediction 425 461 - -
Car02g00348 813 Coils Coil 180 210 - -
Car02g00348 813 Pfam Armadillo/beta-catenin-like repeat 600 639 IPR000225 GO:0005515
Car02g00348 813 Pfam Armadillo/beta-catenin-like repeat 643 680 IPR000225 GO:0005515
Car02g00348 813 Pfam Armadillo/beta-catenin-like repeat 561 598 IPR000225 GO:0005515
Car02g00348 813 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 570 612 IPR000225 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00348 Car20g00844 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00348 Car-Chr2:2520764 Car08g00264 Car-Chr8:1657275 2.40E-63 dispersed
Car04g01263 Car-Chr4:7325666 Car02g00348 Car-Chr2:2520764 6.48E-17 dispersed
Car04g02218 Car-Chr4:18019142 Car02g00348 Car-Chr2:2520764 8.69E-31 dispersed
Car15g00688 Car-Chr15:3824161 Car02g00348 Car-Chr2:2520764 2.20E-33 dispersed
Car07g00597 Car-Chr7:3024887 Car02g00348 Car-Chr2:2520764 1.61E-06 transposed
Car02g00348 Car-Chr2:2520764 Car20g00844 Car-Chr20:5912330 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00348 - - csv:101212423 1332.01