Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00356 ATGGAGTGGGTTCGAGGAGATGAACTGGGTCGTGGAAATTTTGGGACGATCAGTTTAGCAATACTCACAAAGGGCTTCGATCAGTTTCCGCCATTAATGGCGGTGAAATCCTCTGTTTCTGTTTCGGTGTCCTCTGTTTCGCTGAAGAACGAGAAGAAGGTTTTGGATCGAATTGGGAATTGCCCACAAATCGTTACGTGTTATGGCGATGGATTTAGTGTTGAAAGAGATGGGGAGAAGTATTATAATCTGTTCTTGGAGTATGCCAATGGCGGAAGCCTTGCGGATACTGTGAAACTCCACGGCGGTGGGTTGCTGGAATTTGATGTTCGACGGTATACGAGGGCGATTCTTTGTGGGCTTCGGCATGTTCATGGTAATGGGTTTGTTCATTGCGATTTGAAGCTTTCCAATGTGTTGGTTTTTGGGAATGGTGAGGTTAAGATCGCTGATTTTGGGCTTGCGAAAGAGGCCGCGCCGGCGGAAACAGAGGAAACAGAGGAGAAATTTGAGTGGAGAGGGACGCCGATGTATATGTCGCCAGAGACGGTAAACGGCGGGAAGTATGCGCCGCCGTGTGATGTTTGGGCGTTGGGTTGCGCCGTCGTGGAGATGGTGGGAGGAAAGCCGGCGTGGAGGGTTAAGCCAGAAACGGATATATTTGGACTGATGATGATGATCGGAGTCGGAGACGAAGTGCCAGAGCTGCCAGAGAATTTATCGGAGGAGGGGAAAGATTTTCTCCGTCGGTGTTTCGTCAAGGATCCGAGGAAGAGATGGACGGCGGAGATGCTTCTGAATCACCCATTTGTGGCCGGTGCCGGTGAGACTGTTACATTAAAAGAATCGAACCTGACAACCGAGTCGCCGACGGGTCCTTTCGACTTCCCGGAATTCATTTGTTCTTCAAATCAACGTTGCGACGAGATGAATTTGTGTTGTTCTAGTTCCACGGCGGAGATGATGAATAGACTCCGACGGCTAGTGACGGAGAAGCCATTGGATTGGTCTGTTACAGAAAGTTGGGTGACAGTGAGGTGA 1041 49.76 MEWVRGDELGRGNFGTISLAILTKGFDQFPPLMAVKSSVSVSVSSVSLKNEKKVLDRIGNCPQIVTCYGDGFSVERDGEKYYNLFLEYANGGSLADTVKLHGGGLLEFDVRRYTRAILCGLRHVHGNGFVHCDLKLSNVLVFGNGEVKIADFGLAKEAAPAETEETEEKFEWRGTPMYMSPETVNGGKYAPPCDVWALGCAVVEMVGGKPAWRVKPETDIFGLMMMIGVGDEVPELPENLSEEGKDFLRRCFVKDPRKRWTAEMLLNHPFVAGAGETVTLKESNLTTESPTGPFDFPEFICSSNQRCDEMNLCCSSSTAEMMNRLRRLVTEKPLDWSVTESWVTVR 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2582420 2583460 - Carg25140-RA Car02g00356 142842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00356 346 Pfam Protein kinase domain 5 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00356 346 ProSiteProfiles Protein kinase domain profile. 3 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00356 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Car02g00356 346 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00356 Car-Chr2:2582420 Car07g00694 Car-Chr7:3562953 4.47E-136 dispersed
Car02g00356 Car-Chr2:2582420 Car20g00849 Car-Chr20:6095207 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88638 PF00069 Pkinase 3.20E-52 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00356 - - csv:101214756 569.696