Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00362 ATGAAAGGGGGAGAAGAAGAACGGAGGAATCGGGAGAACACGAAACCGTACAAAGGGATAAGGATGAGAAAGTGGGGGAAATGGGTCGCCGAAATTCGTGAGCCCAACAAACGCTCCCGAATCTGGCTCGGTTCCTACTCCTCTCCCGTCGCCGCCGCCCGAGCCTACGACACCGCCGTCTTCCACCTCCGTGGCCCCTCTGCCCGTCTCAATTTTCCCGACTTTTTCACCACCGCCGCCGCCGACCGCCCCTTCCCACTCCCTGCCGACATCTCCGCCTCCACCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCGTGTCGACGCCCTCGAGTCCTCTCTCCGTCACCACTTCCACAACTGTAGAACCGCCGACCAAACTCACCAAACTCCTTCCCCGTCGCCAGCCACGACCACGACAACGACACCCACCAAGCTTCGTTCTGATTCCGGCGGGTTTTCCGATCGGGTTGACCTGAATAAATTGCCCGACCCGGAAGATTCCGACGGCGACTGCGCTAGCACTCCCTGGATAACCTGA 540 60.93 MKGGEEERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFHLRGPSARLNFPDFFTTAAADRPFPLPADISASTVRKIAAEVGARVDALESSLRHHFHNCRTADQTHQTPSPSPATTTTTTPTKLRSDSGGFSDRVDLNKLPDPEDSDGDCASTPWIT 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2680063 2680602 - Carg11605-RA Car02g00362 142848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00362 179 MobiDBLite consensus disorder prediction 151 168 - -
Car02g00362 179 MobiDBLite consensus disorder prediction 124 149 - -
Car02g00362 179 Pfam AP2 domain 17 65 IPR001471 GO:0003700|GO:0006355
Car02g00362 179 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Car02g00362 179 MobiDBLite consensus disorder prediction 123 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01427 Car-Chr1:12308932 Car02g00362 Car-Chr2:2680063 5.29E-48 dispersed
Car02g00362 Car-Chr2:2680063 Car05g00144 Car-Chr5:721418 4.65E-46 dispersed
Car02g00362 Car-Chr2:2680063 Car03g00872 Car-Chr3:6969206 1.19E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2955 PF00847 AP2 1.20E-10 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00362 K09286 - csv:101209150 211.846