Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00371 ATGGATACCTTGTTCAGGCTTGTCTCCAACCTTCATCAACCTTCTGATCAATCTTACAACTCAAGCACCAGCTCCAAGAATTCTGTTGATCTTCAAAATCATTGCTTCCTCAACCCATCTCCACCTGAACAATGCTTCACCAGCTCCATCATGGTGGATCAACAACATTTCTCTGCCTCCTCTTCTTCCAACCATCGTCCTGATAACGACCATGTTCATCAACATCACGAGTATATAAGTACTGTCAATTCGACTGATCGATGGTTCGCCCCTTTAGACGTGAACTTGGAATTCTCTAATGGTTGGGCTTCTACGTTGATCGTCCAAACTGCCATTGCCATTGTTGATAACAACGCTTCTCGAATCCAACAACTCATGTGGATGCTTAACGAGCTCGGTTCGCCCTATGGCGATATTGATCAAAAATTGGCTTTTTACTTTCTTCGAGCTATGTTTAGTCATGTCACGAACTCTGGTGAACGGTGCTACCGAACCTTGGCAATGGTGTCGGAGAAACGGTCTTGTTTCGCGTCGATGAGAAGAATGGTGTTGAAGTTTCAAGAGGTGAGTCCATGGATGACGTTTGGTCATGTTGCTTCAAATGGTGTTATCATGGAGGCTTTTGAAGGAGAGAAGAAGTTGCATATAATTGATATTAGTAACTCCTTTTGTACTCAATGGCCAACTTTCCTCGAAGCTCTAGCATCTCGGTCAGACGAAACTCCACACCTTAGGCTCACGACGCTAGTCGCAGCCAGATCGGATAAGAAGGTGATGAGAGAAATTAGCAGAAGAATGGAGAAATTCGCGAGGCTTATGGGGGTTCCCTTCAAATTCAAAGCAATATATTACTCCGGCGAAATTTCACAGCTAAATTTCACGGAGTTAGGGGTTAATGACGACGAAGCCCTTGCAATTAACTGCGTCGGCGCCTTCCGCTCCGTCACGCCGGTCGAAAACCGCCGCGATTTTCTGATTTCACTGTTCGGAGCTTTGCGGCCGAGGATAATCACTGTGGTGGAGGAGCAGGCAGATCTCGATAGCGACGGCGTTGACTTTGTCAAAGACGTTCAAGAATGTTTACGGTGGTTTAGGGTTTACTTTGATTCCTTGGACGGAAGTTTCCCTTCCACAAGTGATGAAAAGTTGATGCTCGAACGCGCCGCTGGACGCGCTATCGTGGACTTGCTTGCACGCGCGCCAGCGGAGTGTGTTGAGAGGCGCGAGACGGCTGCGCGTTGGGCTCGTCGTTTGCATGAGGGCGGTTTCAAACCGGTGTCGTTTAGTGAGGATGTAAACGACGACGTACGTGCGCTTTTGAGGAGGTATAGGGATGGGTGGACGGTGTTGGATGACGGCGAGGACGCCGATGCCGGAATTTTCTTGGCTTGGAAGGGGCAGGCGGTGGTCTGGGCCGCCGCATGGACGCCTGAACCACTGGACGGAGAGAAGAGTCGCCAGAGTAGTTGTTCACATTGA 1479 48.95 MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSASSSSNHRPDNDHVHQHHEYISTVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGEISQLNFTELGVNDDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2760947 2763277 + Carg11615-RA Car02g00371 142857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00371 492 Pfam GRAS domain family 105 476 IPR005202 -
Car02g00371 492 ProSiteProfiles GRAS family profile. 94 476 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00371 Car07g00624 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00371 Car-Chr2:2760947 Car07g00575 Car-Chr7:2915594 0 dispersed
Car02g00371 Car-Chr2:2760947 Car03g00831 Car-Chr3:6753922 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2956 PF03514 GRAS 2.10E-95 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00371 - - cpep:111795097 936.406