Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00391 ATGTCACAACAAGATTACCACCAGGCGGCGGCGGCGGCGGCGGCAGCAACCTTGTTCACACCCTTCACGAATGGCTTTGACAGATCCTCCACCACCGCCGTTGCCTCCCACCAAGACCCTCAACATCAACACTACAACCACATAGCCCACCAGATCCGAAAGGAGAAGCTCCGCCTCCAAGGCTTAGACCCGCCACCTCCTCAGCCGTCCTTGGTCGGAATTGAGGAGGAGGAGGAGGACGACCAATCTGCTGGGACTGCTGCCCTTCACCATGTCTACGACTCCACCGGAATTTTATCTGAAATGTTCAATTTTCCTCAGCCTCCACGGCCTCAAGCTGAGTGGTATGGAAACCGGCAAGAGATTAACGCCGGTGACTCGGCGGTGGCCATGCAGCTTTTTCTGATGAACCCAAACCCTCGCTCACCGCCACCGCCGACCGTGTCGTCAACCCTCCATATGCTTCTTCCAAACCCTTCTTCAGGAGGGTCTTTTGGACAATTCACATGGGGGGTAGTTCCGGAACAAGAAACAGGAGGAGGAGAAGGAGGAGGAGGAGACTATTCTTCCTCAAACCCTAACGAAGGCCGTCTTTCTTTGTCATTATCCTCGTCCATAGAAGCTGCAAAAGCGGAGGAATTGAGAATGGGTGACAGCGGGTTAGTTTATCAAAACCAACATCACCCTCAACAAGTCCATGTCGGAATTGGGTCTTCTTCTAATTCTTCCTTGGGAGTTGTCAACTTGTTGAGAAACTCAAAGTATGTCAAACCCGCACGAGAATTACTTGAGGAGTTTTGTAGCGTTGGAAGAGATCAGCTTAAAAATAATAATAACAAATTGAACAAGTCAAATTTGACGTCCAACTCCCATGGCGGCGACCGTGGCGGAGTCTCGTCCTCCACGTCAAAGGATCAACCGCAGCCACCGCCACCGCCCGCTTTGTCAGCCGCTGATAGAAATGAACATCAAAGGAGGAAGGTCAAATTGTTATCCATGCTTGATGAGGCATTGCAGGTGGATCGAAGATACAACCATTACTGCGAGCAAATGCAAATGGTGGTGAATTCATTCGACGTCGTGATGGGGTTCGGGGCAGCGGTGCCATACACGGTGTTGGCGCAGAATGCGATGTCGAGGCATTTCAGGTGTTTGAAGGACGCGATAACAGCGCAGCTGAAGCATAGTTGCGAGATGTTGGGTGAGAAAGATGGGGGAGGAGGTGGAAGAGGAGGGTCAGGAATAACTAAGGGAGAAACTCCAAGGCTTAAGCTGTTGGAGCAAAGGTTGAGGCAGCAACGAGCCTTCCACCAAATGGGCATGATGGAACAAGAAGCTTGGCGTCCCCAACGCGGCTTGCCCGAACGCTCTGTCAACATCTTGCGTGCCTGGCTCTTCGAGCACTTTCTTCACCCGTACCCTAGTGATGGTGATAAGCATTTGTTGGCGAGACAGACAGGTTTATCAAGAAATCAGGTATCCAACTGGTTTATTAATGCCAGGGTTCGGCTGTGGAAACCCATGGTGGAAGACATGTATCAACAAGAAGCCAAACAACACCAACAAGATGATCATCATCATACTAATATTAATGATAATAACAATACAGATGAGGACACACAATCCAATCCTCCGCCCACTTCCTCCGCCGCACCACCACCACCACCACCACCCTTCTCCTCCTCCTCCTCCTCCTCCGCATCCACTGCCGTAACCCAGGCGGCTGTGGCGAACTGCTTTCCGGCCACCCAGTATGAGTCAGAGCTGCAGGACACGTGTCGGCGTGTCAGCGTTCTCGCTGCACCTGATCAGCAGATGAGGACCACAAGCGGCTCAGCCACGTCTGACATCCCCGGGCCCACCAGACTCATAAGATTCGGGACCACAGCGGGTGACGTGTCGCTGACACTAGGTTTACGCCACGCCGGAAATATCCCCGACAACAACCCTTCTTTCTCCCTCAGATCCGAGTTCGGAGGCTGTTAA 1986 52.32 MSQQDYHQAAAAAAAATLFTPFTNGFDRSSTTAVASHQDPQHQHYNHIAHQIRKEKLRLQGLDPPPPQPSLVGIEEEEEDDQSAGTAALHHVYDSTGILSEMFNFPQPPRPQAEWYGNRQEINAGDSAVAMQLFLMNPNPRSPPPPTVSSTLHMLLPNPSSGGSFGQFTWGVVPEQETGGGEGGGGDYSSSNPNEGRLSLSLSSSIEAAKAEELRMGDSGLVYQNQHHPQQVHVGIGSSSNSSLGVVNLLRNSKYVKPARELLEEFCSVGRDQLKNNNNKLNKSNLTSNSHGGDRGGVSSSTSKDQPQPPPPPALSAADRNEHQRRKVKLLSMLDEALQVDRRYNHYCEQMQMVVNSFDVVMGFGAAVPYTVLAQNAMSRHFRCLKDAITAQLKHSCEMLGEKDGGGGGRGGSGITKGETPRLKLLEQRLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDGDKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQEAKQHQQDDHHHTNINDNNNTDEDTQSNPPPTSSAAPPPPPPPFSSSSSSSASTAVTQAAVANCFPATQYESELQDTCRRVSVLAAPDQQMRTTSGSATSDIPGPTRLIRFGTTAGDVSLTLGLRHAGNIPDNNPSFSLRSEFGGC 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2948817 2952860 - Carg11636-RA Car02g00391 142877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00391 661 MobiDBLite consensus disorder prediction 516 533 - -
Car02g00391 661 MobiDBLite consensus disorder prediction 274 304 - -
Car02g00391 661 Pfam Homeobox KN domain 464 503 IPR008422 GO:0003677|GO:0006355
Car02g00391 661 MobiDBLite consensus disorder prediction 274 324 - -
Car02g00391 661 MobiDBLite consensus disorder prediction 401 420 - -
Car02g00391 661 MobiDBLite consensus disorder prediction 546 561 - -
Car02g00391 661 MobiDBLite consensus disorder prediction 514 566 - -
Car02g00391 661 ProSiteProfiles 'Homeobox' domain profile. 444 507 IPR001356 GO:0003677
Car02g00391 661 MobiDBLite consensus disorder prediction 174 198 - -
Car02g00391 661 Pfam Associated with HOX 250 390 IPR006563 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00391 Car-Chr2:2948817 Car14g00330 Car-Chr14:1571650 3.10E-86 dispersed
Car02g00391 Car-Chr2:2948817 Car20g00987 Car-Chr20:11517710 0 wgd
Car02g00391 Car-Chr2:2948817 Car03g00922 Car-Chr3:7251035 2.37E-138 wgd
Car02g00391 Car-Chr2:2948817 Car07g00733 Car-Chr7:3779080 6.43E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2959 PF07526 POX 2.30E-48 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00391 - - cmax:111470356 865.529