Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00404 ATGTCGGGCCAAACCCAGCGTTTGAATGTAGTTCCAACAGTAACAATGCTTGGAGCGATGAAAGCTCGTCTTATTGGTGCAACCAGAGGTCATGCTCTCCTCAAGAAGAAGAGTGATGCTTTGACTGTTCAGTTCCGTCAGATACTCAAGAAGATTGTCTCAGCTAAGGAGTCAATGGGAGAAGTCATGAAGACATCTTCATTTTCTCTTACCGAAGCGAAATATGTTGCTGGCGACAACATCAAGCATATCGTCCTTGAGAATGTCCAAAATGCAGCTATTAAGATTCGATCTCGGCAGGACAACATTGCTGGTGTAAAACTCCCGAAATTTGAACATTATTCGGATGGTGAGACCAAAAATGATCTCACAGGGCTAGCCAGGGGTGGACAACAGATCCAGCTATGTCGTGGCGCGTATGTGAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCACTTCAGACGTCATTTTTGACTCTTGACGAGGCAATTAAAACCACAAACCGCAGGGTTAACGCTCTAGAGAATGTGGTGAAGCCAAGGATAGAGAATACTATAAGTTACATCAAGGGAGAATTGGACGAGCTAGAAAGGGAGGATTTCTTTAGACTGAAAAAGATTCAGGGTTATAAGAGAAGGGAAATCGAGAGACAACGAGCCAACGCCAAGCTATATGCGGAGGAACAGCTTGCTGAGAAGGTGTCATTGCAGAAGGGCGTCTCCATAAGTTCAGCTTACAGTCTATTGTCTGCAGCTGGTGAGAAGGATGAGGATATTATATTTTGA 786 44.4 MSGQTQRLNVVPTVTMLGAMKARLIGATRGHALLKKKSDALTVQFRQILKKIVSAKESMGEVMKTSSFSLTEAKYVAGDNIKHIVLENVQNAAIKIRSRQDNIAGVKLPKFEHYSDGETKNDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRANAKLYAEEQLAEKVSLQKGVSISSAYSLLSAAGEKDEDIIF 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3126192 3126977 + Carg11649-RA Car02g00404 142890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00404 261 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 261 IPR002699 GO:0046961
Car02g00404 261 Gene3D - 1 198 - -
Car02g00404 261 Pfam ATP synthase subunit D 17 208 IPR002699 GO:0046961
Car02g00404 261 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 1 261 - -
Car02g00404 261 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 211 IPR002699 GO:0046961
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00404 Car-Chr2:3126192 Car11g01633 Car-Chr11:12902734 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00404 K02149 - csv:101213101 477.633