Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g00404 | ATGTCGGGCCAAACCCAGCGTTTGAATGTAGTTCCAACAGTAACAATGCTTGGAGCGATGAAAGCTCGTCTTATTGGTGCAACCAGAGGTCATGCTCTCCTCAAGAAGAAGAGTGATGCTTTGACTGTTCAGTTCCGTCAGATACTCAAGAAGATTGTCTCAGCTAAGGAGTCAATGGGAGAAGTCATGAAGACATCTTCATTTTCTCTTACCGAAGCGAAATATGTTGCTGGCGACAACATCAAGCATATCGTCCTTGAGAATGTCCAAAATGCAGCTATTAAGATTCGATCTCGGCAGGACAACATTGCTGGTGTAAAACTCCCGAAATTTGAACATTATTCGGATGGTGAGACCAAAAATGATCTCACAGGGCTAGCCAGGGGTGGACAACAGATCCAGCTATGTCGTGGCGCGTATGTGAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCACTTCAGACGTCATTTTTGACTCTTGACGAGGCAATTAAAACCACAAACCGCAGGGTTAACGCTCTAGAGAATGTGGTGAAGCCAAGGATAGAGAATACTATAAGTTACATCAAGGGAGAATTGGACGAGCTAGAAAGGGAGGATTTCTTTAGACTGAAAAAGATTCAGGGTTATAAGAGAAGGGAAATCGAGAGACAACGAGCCAACGCCAAGCTATATGCGGAGGAACAGCTTGCTGAGAAGGTGTCATTGCAGAAGGGCGTCTCCATAAGTTCAGCTTACAGTCTATTGTCTGCAGCTGGTGAGAAGGATGAGGATATTATATTTTGA | 786 | 44.4 | MSGQTQRLNVVPTVTMLGAMKARLIGATRGHALLKKKSDALTVQFRQILKKIVSAKESMGEVMKTSSFSLTEAKYVAGDNIKHIVLENVQNAAIKIRSRQDNIAGVKLPKFEHYSDGETKNDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRANAKLYAEEQLAEKVSLQKGVSISSAYSLLSAAGEKDEDIIF | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3126192 | 3126977 | + | Carg11649-RA | Car02g00404 | 142890 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g00404 | 261 | PANTHER | V-TYPE ATP SYNTHASE SUBUNIT D | 1 | 261 | IPR002699 | GO:0046961 | |
Car02g00404 | 261 | Gene3D | - | 1 | 198 | - | - | |
Car02g00404 | 261 | Pfam | ATP synthase subunit D | 17 | 208 | IPR002699 | GO:0046961 | |
Car02g00404 | 261 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT D-RELATED | 1 | 261 | - | - | |
Car02g00404 | 261 | TIGRFAM | V_ATPase_subD: V-type ATPase, D subunit | 9 | 211 | IPR002699 | GO:0046961 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00404 | Car-Chr2:3126192 | Car11g01633 | Car-Chr11:12902734 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g00404 | K02149 | - | csv:101213101 | 477.633 |