Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00411 GCTCGGGATTCTTCTGGCTTACTCTCCCCCTTTCATTTCTCTCGAAGAGAAAATGGTGGCGATGATGTGAGTATCAAAGTCCTTTACTGTGGGGTTTGCCATTCAGATCTGCATCTGCTGAAGAACGATTGGGGTGTCACAGATTATCCAATAGTCCCAGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGGAACAATGTGAACAAATTCAAAGTGGGCGATCAAGTAGGGGTAGGTGTCATAGTTGGATCTTGCAAAAGTTGCCAAAACTGCGAACAAAACTTAGAGAATTACTGCCCCAAGTTGATATATACTTACAATGGACATTCATATGATGGAGCAAAGACTTATGGTGGTTATTCTGATAGCATTGTCGTCGATCAGCATTTCGTGCTCCGATTTCCCGACAACTTACCCCTTGATGCCGGAGCTCCTCTTCTGTGCGCTGGAATCACAATCTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACGTCTCCGAGAAAGAAGGAGGAAGCTATCGACAGGCTCGGTGCCGATGCTTTCGTTGTTTCGAGTGATCCTGCACAATTGAAGGCTGCGATGGGGACGATGGATTACATTATTGACACGGTATCAGCTATCCATGCTCTTGCTCCATTGCTTGGTCTGCTAAAGCTGAATGGGAAGTTGGTGACTGTGGGGTTACCTAACAAGCCACTAGAACTCCCAGTTGCTGCTATAGTGCTCGGTAGGAAGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGGTAAACATAACATCACAGCAGAGATTGAGCTGATTCGTATGGACGATATTAACACTGCCATCGAACGCCTTGAGAAAGCCGATGTTCGATATCGGTTCGTGATTGACATTGGAAACTCCTTCAAATAG 1026 45.32 ARDSSGLLSPFHFSRRENGGDDVSIKVLYCGVCHSDLHLLKNDWGVTDYPIVPGHEIVGVVTSVGNNVNKFKVGDQVGVGVIVGSCKSCQNCEQNLENYCPKLIYTYNGHSYDGAKTYGGYSDSIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPAQLKAAMGTMDYIIDTVSAIHALAPLLGLLKLNGKLVTVGLPNKPLELPVAAIVLGRKMVGGSNFGGLKETQEMLDFCGKHNITAEIELIRMDDINTAIERLEKADVRYRFVIDIGNSFK 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3216163 3218433 + Carg11656-RA Car02g00411 142897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00411 341 Pfam Alcohol dehydrogenase GroES-like domain 21 133 IPR013154 -
Car02g00411 341 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 54 68 IPR002328 GO:0008270|GO:0016491
Car02g00411 341 Pfam Zinc-binding dehydrogenase 177 298 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00411 Car-Chr2:3216163 Car03g00777 Car-Chr3:6486582 5.66E-160 dispersed
Car02g00411 Car-Chr2:3216163 Car20g00941 Car-Chr20:10326946 1.48E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00411 K00083 - csv:101205228 563.533