Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00417 ATGGGTTCTAAATCCCAAATCTTATTAAACCCACAAGCTTTGTTTGAAGATGAAGAACATGAACAAGCATCAACTCAACATCAAATGGAATTCTTCTCTTTCCCTTCAAACTTCAACGTTTCTCATCTTCCTTCAATCCCCCAACACCAAACCCTTTCTCCTTCCACTCCCTTTCTTCACCCTAACCTCTCTCAAACCCTTAACTCCTCTCATTTTCCTACTCCACACCTTCTTTCCTTGCAAACCTCCACTCCAAATCCATGGGCATTTGGGAAGAGAAATGAGTATCATTTGGGATTGGGAGTATCAACCATGAAGATGAAGAGGATGAAAGGAAGAAGAAAAGTGAGAGAGCCAAGATTCTCATTCAAGACCATGACCGATGTCGATAAACGAGTAGAGAGATTAGATGAAGATCCAAGAATGGTGATAACAACATATGAAGGACGGCACATTCATTCTCCTTCCCATGATACTCGAGACTACGAACCTCATACCCATCTCAACAATTTCTTT 516 41.09 MGSKSQILLNPQALFEDEEHEQASTQHQMEFFSFPSNFNVSHLPSIPQHQTLSPSTPFLHPNLSQTLNSSHFPTPHLLSLQTSTPNPWAFGKRNEYHLGLGVSTMKMKRMKGRRKVREPRFSFKTMTDVDKRVERLDEDPRMVITTYEGRHIHSPSHDTRDYEPHTHLNNFF 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3278398 3279866 - Carg11662-RA Car02g00417 142903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00417 172 MobiDBLite consensus disorder prediction 152 172 - -
Car02g00417 172 ProSiteProfiles WRKY domain profile. 108 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00417 Car03g00946 CCT
Car02g00417 Car20g00950 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00417 Car-Chr2:3278398 Car06g00779 Car-Chr6:6012452 1.21E-13 dispersed
Car02g00417 Car-Chr2:3278398 Car20g00950 Car-Chr20:10898379 4.91E-51 wgd
Car02g00417 Car-Chr2:3278398 Car03g00946 Car-Chr3:7357790 2.21E-24 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2962 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00417 - - cmo:103497483 177.563