Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00432 ATGTCATCGTCCAACTCCCCCTGCGCAGCCTGCAAATTCCTCCGCCGAAAATGCACGCAAGAGTGCGTATTCGCCCCCTATTTCCCACCCGATCAGCCCCAGAAATTCGCCAATGTGCACAAGGTATTCGGTGCAAGCAACGTGACAAAGCTATTGAACGAATTGAACGCCACACAGCGCGAGGACGCAGTGAACTCATTAGCCTACGAGGCAGAGTTTCGTTTGCGTGACCCTGTGTACGGATGTGTCGGCCTTATTTCAGTCCTACAACACAAGCTAAAACAAATGCAAACAGATCTCTATAACGCCAAAAAGGAGCTCTCTACCTACATTGGCTCTCAAGCTATGCTTCCAATTCTTCAGCCACCCATTGCCGGAAACCACCCTTCCTCCTCCTCCTCCTCCGCCTCCTCCGCCGCCGCTCTCCTTCCGTACAATATGTTCCCCATGCTTGGAATCCCGAATTCCGCGGCCGCTCCCTCATCGTCCCACCAGATGCTCATTCGTGACACGCCTCAACAGACCCAGACCCAGACTCAGACCCAGAATCAGAATCAGTTGTTTGAGGCGCAGCAGTTGGCGGCGGCGGTGGCTGCTAGAGAACAGCAGGAGATGTTTAGGGCTTATGAGCAGAAACAAAACCAAACACAAACCCAACATCATTCGCAACGCCAACAGGAGCTGATGAGGTTCGATGGGTTCGACCCGGCTGGGAACCAAATCAATTCCTCTGGGTCTAATTTAACATTGGGGACGTTTGTTGATAATAGCTACCAAATTGAAGCGCAACCGCTTCAGGTGCAGCTGTTTCTTCAGCCCCAACAGACATTGGTTGAGCAACACCCACAAACACAACACAAGCCTGAACCCACCGCGGAGGATGGTAGGAACATGAACATGGGCCCATCGTGCTAA 915 52.35 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELNATQREDAVNSLAYEAEFRLRDPVYGCVGLISVLQHKLKQMQTDLYNAKKELSTYIGSQAMLPILQPPIAGNHPSSSSSSASSAAALLPYNMFPMLGIPNSAAAPSSSHQMLIRDTPQQTQTQTQTQNQNQLFEAQQLAAAVAAREQQEMFRAYEQKQNQTQTQHHSQRQQELMRFDGFDPAGNQINSSGSNLTLGTFVDNSYQIEAQPLQVQLFLQPQQTLVEQHPQTQHKPEPTAEDGRNMNMGPSC 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3418787 3419701 + Carg11677-RA Car02g00432 142918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00432 304 MobiDBLite consensus disorder prediction 277 304 - -
Car02g00432 304 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Car02g00432 304 Coils Coil 86 106 - -
Car02g00432 304 MobiDBLite consensus disorder prediction 159 184 - -
Car02g00432 304 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00432 Car-Chr2:3418787 Car10g00093 Car-Chr10:418205 5.97E-53 dispersed
Car15g00168 Car-Chr15:906004 Car02g00432 Car-Chr2:3418787 4.94E-46 dispersed
Car05g00698 Car-Chr5:4724611 Car02g00432 Car-Chr2:3418787 2.67E-61 transposed
Car02g00432 Car-Chr2:3418787 Car20g00967 Car-Chr20:11172185 2.48E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2963 PF03195 LOB 1.40E-41 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00432 - - cmos:111434896 362.844