Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00463 ATGGCGGCGGGTGAAGGATGTCCATTGAAGCTCTACTCCTACTACCTCAGCACTTGTGCTCAACGTGTTCGAATAGCTCTTAACTTAAAAGGGCTAAGGTTTGAGTACAAAGCTGTTGATCTTATGAAGGGAGAGCATTTGAGTCCTGACTTTCTAAAGCTCAATCCCGTTGGCTTTGTACCTGCTCTCGTGGATGGCGATATCGTCATTGCCGACTCTTTTGCTATAATAATGTATTTAGAGGAGAAGTATCCTCAACATCCTCTATTGCCGAGTGATCTTTATAAAAGAGCTATCAATTACCAGGCTGCAAATATTGTTTCTTCAAGCATACAACCTCTTCAAAACCTAATTGTTGAGAATTACATTGAGGAAAAATGTGGTGTAGAGGACAAACTCTCTTGGGTTCATATGATCATTGGAAAAGGTTTTTTAGCACTTGAGAAGTTACTAAAGGATCATGCTGGAAAATTTGCCACTGGAGATGAAATTTACCTGGCGGACTTGTTTTTGGCACCTCAACTCTACCGTGCCATTGAGACATTCAATGTTGACATGTCCAAGTTTCCACTTCTGTCAAGATTGTATGAGGAATACAAGGAGGTACCAGCATTTGAAGATGCAGCACCAGAGAAGCAGCCTGATGCTCCTTCTCAAACCTCAGCCTAA 669 41.85 MAAGEGCPLKLYSYYLSTCAQRVRIALNLKGLRFEYKAVDLMKGEHLSPDFLKLNPVGFVPALVDGDIVIADSFAIIMYLEEKYPQHPLLPSDLYKRAINYQAANIVSSSIQPLQNLIVENYIEEKCGVEDKLSWVHMIIGKGFLALEKLLKDHAGKFATGDEIYLADLFLAPQLYRAIETFNVDMSKFPLLSRLYEEYKEVPAFEDAAPEKQPDAPSQTSA 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3616286 3620783 + Carg11708-RA Car02g00463 142949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00463 222 Pfam Glutathione S-transferase, C-terminal domain 132 204 IPR004046 -
Car02g00463 222 Pfam Glutathione S-transferase, N-terminal domain 11 87 IPR004045 -
Car02g00463 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 88 IPR004045 -
Car02g00463 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 218 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00463 Car-Chr2:3616286 Car06g00974 Car-Chr6:7464725 1.73E-86 dispersed
Car14g00753 Car-Chr14:4211907 Car02g00463 Car-Chr2:3616286 2.99E-06 dispersed
Car02g00463 Car-Chr2:3616286 Car02g00464 Car-Chr2:3624686 4.50E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00463 K01800 - csv:116401624 371.318