Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car02g00487 | ATGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGTAAATGGTACGAGCTTCTAACTACCCACAAAGAAGAGATTGGACAATTGATAACCTTAGAGCAAGGCAAACCATTAAAGGAATCAGTGGGTGAGATAAACTACGGAGCCAGCTTTCTTGAATTCTTTTCCGAGGAAGCAAAACGAGTATACGGTGACATAATCTCACCAACTATAGCTGATCGTCGACTTTTTGTGTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTATTACCCCTTGGAACTTTCCGTTGGCTATGATTACACGGAAGGTTGCACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAACTTACTCCCTTGACAGCTTTAGCAGCAGCTGAGCTCTCACTGCAAGCTGGAATTCCCCCAGGTGTAGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTACACAGGTTAGAAAAATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAATTGATGGCTGGAGCTGCTGGGACTGTTAAAAAGGTGTCCTTAGAACTTGGGGGTAATGCACCTCACATAGTCTTTGATGATGCAGATGTGGATGTTGCAGTAAAAGGAGTTATTGCATCGAAGTTTCGGAATAGTGGACAGACTTGTGTTTCTGCCAATAGGATCCTTGTTCAAGAAGGCATATACGAGAAATTTTGTAATGCTTTCTCAAAAGCTGCGCAAGATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTTGCTCAGGGTCCTTTGATTAATGAAGCTGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCATCACAAAGGTTTGTTTCTGA | 879 | 44.14 | MSWSKLTAADRSNRLRKWYELLTTHKEEIGQLITLEQGKPLKESVGEINYGASFLEFFSEEAKRVYGDIISPTIADRRLFVLKQPVGVVGVITPWNFPLAMITRKVAPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASTQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPHIVFDDADVDVAVKGVIASKFRNSGQTCVSANRILVQEGIYEKFCNAFSKAAQDLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDAITKVCF | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 3781178 | 3787797 | + | Carg11733-RA | Car02g00487 | 142973 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car02g00487 | 292 | Pfam | Aldehyde dehydrogenase family | 2 | 289 | IPR015590 | GO:0016491 | |
| Car02g00487 | 292 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 193 | 200 | IPR029510 | GO:0016491 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g00487 | Car-Chr2:3781178 | Car11g00103 | Car-Chr11:583895 | 3.88E-67 | dispersed | |
| Car02g00487 | Car-Chr2:3781178 | Car20g00250 | Car-Chr20:1444254 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car02g00487 | K17761 | - | csv:101217352 | 497.664 |