Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00508 ATGCAAGATCCAGCGTCTTCAAACCCTATCCACACTCCCAATTCCAATCAAATTCCTCCCTTCGATGTTGCACCGCCGCCGAAGACTCATAAACTGCCGCCGGTGGTGAACGCGACGGCTTCCTCATCCATGTTTGCCAATGCGAATGCTGGTAATGCCTCGTTTGTGCCTAGAGGTGGTTCACATCATCGGAGGGCTCATTCGGAAGTTAGCTTCCGATTGACGGAGGACACTATGGATCTCTCCGGCTCGGATCCGTTCAACGGCGGTTTGTCAACGGCTAGTCTGGAGGAGATCGGATCGGAGGATGATCTGTTTTCGACCTACATTGATGTGAAGAAGCTTGGAGGTAATGGAGGAGGGAATTTCGTGGATCAAAATGCCAATGGCGGAAGTGAAGGCGCCGGTGGTAGTGAGGGGGAGAAGACTCCGAAGCCAAGGCATCGACATAGCTTATCGGTGGATGGAACGACATCGTCATCGAGTATGTTTGGGGAGGTTATGGAAGCGAAGAAAGCTATGCCTCCTGATAAATTGGCTGAGCTTTGGAGCAGTGACCCCAAACGCGCCAAGAGGATATTAGCAAATCGACAGTCTGCTGCTCGCTCAAAAGAGAGGAAGGCACGGTATATACAAGAGTTGGAGCGCAAGGTGCAGACCCTTCAAACAGAAGCAACTACTCTATCAGCCCAATTAACTTTGTTCCAGCGAGATACAAGGGGTCTCAGTAACGAGAATACAGAGCTTAAGCTTAGGTTACAGGCTATGGAGCAACAAGCTCAATTGCGTGATGCTCTAAACGATGCATTAAAGAAGGAAGTCGAGAGGCTTAAATTCGCTACCGGGGAAATGATGAGCCCTTCTGAGTCTTTTAACTTGGGAATGCATCACATGGCATATGCCCCATCGTCTTTCGTTCAACTTTCACAGCAACCAGCAGGTCCTCAGAATATGCAACTGCCACCATATAGCCATTCCCCATCTAACATGTCTAGCCACCCTATGCATCCATCAGAATCTCATTCTCTCTCGGAGGTTCTGCAGAGCGACCCTCTCGGCCGATTACAGGGTCTAGACATCAGTAGTAAAGGATCGTCACTTGTGAAATCTGAGGTCCCCTCAATCTCTGCAAGTGAGAGCAGTACAACTTTTTGA 1155 49.44 MQDPASSNPIHTPNSNQIPPFDVAPPPKTHKLPPVVNATASSSMFANANAGNASFVPRGGSHHRRAHSEVSFRLTEDTMDLSGSDPFNGGLSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNFVDQNANGGSEGAGGSEGEKTPKPRHRHSLSVDGTTSSSSMFGEVMEAKKAMPPDKLAELWSSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTRGLSNENTELKLRLQAMEQQAQLRDALNDALKKEVERLKFATGEMMSPSESFNLGMHHMAYAPSSFVQLSQQPAGPQNMQLPPYSHSPSNMSSHPMHPSESHSLSEVLQSDPLGRLQGLDISSKGSSLVKSEVPSISASESSTTF 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3978344 3980816 + Carg11756-RA Car02g00508 142994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00508 384 MobiDBLite consensus disorder prediction 1 35 - -
Car02g00508 384 MobiDBLite consensus disorder prediction 308 349 - -
Car02g00508 384 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 249 IPR004827 GO:0003700|GO:0006355
Car02g00508 384 MobiDBLite consensus disorder prediction 121 161 - -
Car02g00508 384 Coils Coil 239 259 - -
Car02g00508 384 MobiDBLite consensus disorder prediction 359 384 - -
Car02g00508 384 MobiDBLite consensus disorder prediction 308 384 - -
Car02g00508 384 Pfam bZIP transcription factor 188 236 IPR004827 GO:0003700|GO:0006355
Car02g00508 384 MobiDBLite consensus disorder prediction 1 18 - -
Car02g00508 384 Coils Coil 204 231 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00663 Car02g00508 CCT
Car02g00508 Car20g00269 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00508 Car-Chr2:3978344 Car04g00991 Car-Chr4:5708876 8.91E-101 dispersed
Car01g00663 Car-Chr1:3913993 Car02g00508 Car-Chr2:3978344 6.42E-151 transposed
Car04g02353 Car-Chr4:18925173 Car02g00508 Car-Chr2:3978344 1.13E-56 transposed
Car06g00794 Car-Chr6:6127469 Car02g00508 Car-Chr2:3978344 1.95E-54 transposed
Car20g00269 Car-Chr20:1559284 Car02g00508 Car-Chr2:3978344 1.33E-93 transposed
Car02g00508 Car-Chr2:3978344 Car20g00267 Car-Chr20:1557566 1.69E-93 wgd
Car02g00508 Car-Chr2:3978344 Car04g00101 Car-Chr4:554890 2.47E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2975 PF00170 bZIP_1 3.60E-08 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00508 - - csv:101205663 579.711