Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00510 ATGAAGACAGTGTATAAAGCCATTGATGAGTTTCTAGGAATAGAGGTGGCGTGGAGTCGGGTGAAACTCAACGAGGTTCTCCGATCACCGGAGGATTTGCAGCGGTTGTATTCCGAGGTTCACTTACTTAGCACGCTTAAGCATGAATCCATCATGCAGTTCTACACTTCATGGATTGATGTTGATCACAAAACCTTTAACTTTATTACCGAACTCTTTACTTCTGGAACGCTCAGAGAATATGGGAAGAGATATAGCCAAGTTGATATTAGAGCTATTAAGAGCTGGGCGCGCCAGATCCTGTTGGGGCTCGTTTATTTGCACGAGCACGATCCTCCGATAATACACCGAGATTTGAAGTGTGACAATATCTTTGTCAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCTGCTATACTCCATGGTTCCAAATCTGCTCATAGTGTTATAGGCACGCCAGAGTTTATGGCACCTGAATTATACGAGGAGGATTACAATGAGCTCGTAGATGTCTACTCATTTGGCATGTGTGTCCTAGAGATGCTCACTGCTGAGTATCCATATAGCGAGTGTTCTAATCCCGCACAGATCTACAAGAAAGTCACGTCGGGGAAGCTGCCAGCAGCATTGTACAAGATTCAAGATGTCGAGGCGCAGAGATTCATCAAGAAATGCTTGGTACCGGTATCGATGAGGGCGTCCGCTAAGGAGCTGTTGGCTGATCCTTTTCTCATGGTTGATGGAGATAGACCTTCATCAAAAGAGAGGAAGCAAACCCAGAAGCCATTTTTGAATGCTAAAGAGATGGAGAAATTGCACTTGGGTGACGGTTTAAGCAGGACGAAGATGACGATCACGGGGAAGCTGAACCACGAAGACGATACCCTCTTTCTCAGAGTTCAAACTGCAGATAAAGATGGTTCGCTTAGGAACATATATTTCCCGTTCGACATAGTGAACGACACGGCATTGGACGTGGCGATCGAGATGGTGAAAGAGTTAGAGATCTCTGATTGGGAGCCTTTTGAAATAGCAGACATGATAGAAGGAGAGATATCAGCTCTGGTTCCAAACTGGAATAGAAGTGAGTTGTCCAACCATAGTCTCAGCTTCAGCTATGCAGAAGACGACGACGACGACGTTTCGTGTCATCGTAATTTCCGCTCTAACTCCTCGTCGTCCCAACCTACATTGTTAGGCTTCATCGGCTCCCCGAGCACAAACCGAAACATACCAAATGGTTTTAGTTGGTTCCCAGATGACACCCTTGATGATAGCAGTTCACAATGCTCGTCGACATCGGGAACATACTCCAACTTCAATTACATCAGCAACGACGAGTACGAAACCAGTTCGGTTCGAACAGATCAACATAAGATTCACAACTCCTCGAGATTTTGTCCCATTGAGAACCGGAAAAACAAGGATTTCTTGGGTGGAGTTTTGTACAAGCCGAGCCAATATGCGGTCGGGGCGTCCCAAGGAGCAGCATCGAGTCGTAAAGACAAGAGGGGAGGAACGGATGGGCGTAGATTAACAAGAAACAGGTCACTAGTTGATGTACACAGCCAATTGTTGCATCTTTCGTTGGTCGAGGAAGTGAATAGAAGACGGTTATTCAAGACGGTCGGAGCGGTTGAAAGCATCGGTTTTCAAGCGCCTTGTGAGGTTTCTTCGAGCAGCAAAAGGGTGTCGAGTAGGCAAGCGATCGGGAACCGAAGTAGCGATGTAACGAGAACGAGAAGAAATGGTGATACTAGGCAAGATGTTTGGAAGAGAACATGA 1797 46.3 MKTVYKAIDEFLGIEVAWSRVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMQFYTSWIDVDHKTFNFITELFTSGTLREYGKRYSQVDIRAIKSWARQILLGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSKSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMLTAEYPYSECSNPAQIYKKVTSGKLPAALYKIQDVEAQRFIKKCLVPVSMRASAKELLADPFLMVDGDRPSSKERKQTQKPFLNAKEMEKLHLGDGLSRTKMTITGKLNHEDDTLFLRVQTADKDGSLRNIYFPFDIVNDTALDVAIEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELSNHSLSFSYAEDDDDDVSCHRNFRSNSSSSQPTLLGFIGSPSTNRNIPNGFSWFPDDTLDDSSSQCSSTSGTYSNFNYISNDEYETSSVRTDQHKIHNSSRFCPIENRKNKDFLGGVLYKPSQYAVGASQGAASSRKDKRGGTDGRRLTRNRSLVDVHSQLLHLSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSSKRVSSRQAIGNRSSDVTRTRRNGDTRQDVWKRT 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3991606 3994356 + Carg11758-RA Car02g00510 142996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00510 598 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00510 598 MobiDBLite consensus disorder prediction 566 581 - -
Car02g00510 598 Pfam Protein kinase domain 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00510 598 MobiDBLite consensus disorder prediction 496 515 - -
Car02g00510 598 MobiDBLite consensus disorder prediction 566 598 - -
Car02g00510 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Car02g00510 598 MobiDBLite consensus disorder prediction 582 598 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00510 Car-Chr2:3991606 Car08g01027 Car-Chr8:7007254 5.89E-153 dispersed
Car19g00278 Car-Chr19:3585697 Car02g00510 Car-Chr2:3991606 0 transposed
Car02g00510 Car-Chr2:3991606 Car20g00273 Car-Chr20:1588862 1.21E-37 wgd
Car02g00510 Car-Chr2:3991606 Car03g00258 Car-Chr3:3787593 2.81E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88644 PF00069 Pkinase 1.20E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00510 K08867 - csv:101203757 988.408