Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00512 ATGGAAAAATTAGGAAGATTCTTCCAAATCTTGTTCTATAATATAACAATCTCTTCTCCCTCTCTGTTTCTTTTTATAATCATTTTCAAAATCCTCTTCTCTTCTCTTCTCTACCATTTTGATTCTCTTTCATTTTTCTCTGTAATTTCGATTCGATCTCTGGCCTTTCGCAGCCTGATGCCGGAGATCGAACCCTACTCCGCCGGCAATAATGCCCTGTTTGGCAAGTACGAGCTTGGCAAGCTCCTCGGCTGCGGCGCCTTTGCCAAGGTCTACCATGCCCGCGACCTTCGCTCCGGCCAGAGCGTCGCCGTCAAAGTCATCAATAAGAAGAAGATCTATGGCACAACGCTAATGTCTAACATCAAGAGGGAGATCGATATCATGCGCCGTCTTCGCCATCCACACATCGTCAAACTCCATGAGGTTCTCGCTACCAAATCCAAGATCTACTTTGTTATGGAATTCGTCAAAGGAGGTGAGCTCTTTGCCAAGGTTGCTAAGGGCCGATTCAGCGAGGATTTGAGCAGGAAATTCTTCCAGCAATTGATTTCTGCTGTCGGATTTTGTCACGCGCGTGGGATCTACCACCGCGATCTGAAGCCGGAGAATCTCCTCGTCGACGAGAATGGAAATCTCAAGGTCTCGGACTTCGGACTCAGTGCGTTAACGGACCAGATCCGCTCCGATGGCCTTTTGCACACACTCTGTGGAACTCCGGCGTATGTGGCGCCGGAGATCTTGTCGAAGAAGGGATACGACGGTGCTAAAGTCGATGTGTGGTCCTGTGGTGTGATTCTTTTCGTGTTGAGTGCTGGTTACCTTCCGTTCAATGATCCGAATCTTATGGCTATGTACAAGAAGATTTACAAGGGAGAATATCGGTGCCCTAAATGGATGTCGCCGGACCTCAAGAGATTTCTATCGCGACTTCTCGACACGAATCCTCAAACTAGAATCACCGTCGATGAGATTCTCAGCGATCCGTGGTTCAAAAAAGGACCAATTAAGGAGATCAATTTCTACGATGATTACGAGGTGAAATATGAAGAGAAGGACGAATCTGAATCGAAGAATTTGAACGCATTCGACCTTATATCATTCTCATCTGGATTAGATCTCTCCGGTTTGTTCGACAATTCGCACAACACAGAGGCGGACAGTGAGCGATTCGTATCAGCAGAGTCTCCAGAGAAGATCGTGGAGAAAATCGAAGAACTCGCTAGGGCAGAGAATTTGAAGGTGAAGAAACAAAAGGAATTTGGAGTTGAATTGGATGGGCAGAATCGTAATTTATCAATCGGAATCGAAATTTTCCGGTTAACCGACGGATTGGTAGTGGTGGAGGCGAGAAGAAGAAGTGGAGATGCAGAATCGTGTAAGGAATTGTTGAAGAAGAAGCTCAAATGTCACCTCACCGGCAACGAAGCGTCGACGTCAACATCACAACAAGATTCCGGCGACCAAAACCAGTGA 1476 46.61 MEKLGRFFQILFYNITISSPSLFLFIIIFKILFSSLLYHFDSLSFFSVISIRSLAFRSLMPEIEPYSAGNNALFGKYELGKLLGCGAFAKVYHARDLRSGQSVAVKVINKKKIYGTTLMSNIKREIDIMRRLRHPHIVKLHEVLATKSKIYFVMEFVKGGELFAKVAKGRFSEDLSRKFFQQLISAVGFCHARGIYHRDLKPENLLVDENGNLKVSDFGLSALTDQIRSDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFVLSAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSPDLKRFLSRLLDTNPQTRITVDEILSDPWFKKGPIKEINFYDDYEVKYEEKDESESKNLNAFDLISFSSGLDLSGLFDNSHNTEADSERFVSAESPEKIVEKIEELARAENLKVKKQKEFGVELDGQNRNLSIGIEIFRLTDGLVVVEARRRSGDAESCKELLKKKLKCHLTGNEASTSTSQQDSGDQNQ 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4003411 4004966 + Carg11760-RA Car02g00512 142998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00512 491 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Car02g00512 491 Coils Coil 400 420 - -
Car02g00512 491 ProSiteProfiles Protein kinase domain profile. 77 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00512 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Car02g00512 491 Pfam Protein kinase domain 77 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00512 491 ProSiteProfiles NAF domain profile. 355 379 IPR018451 GO:0007165
Car02g00512 491 Pfam NAF domain 358 417 IPR004041 GO:0007165
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00512 Car20g00275 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00512 Car-Chr2:4003411 Car07g01183 Car-Chr7:7170469 5.78E-178 dispersed
Car14g01592 Car-Chr14:12917140 Car02g00512 Car-Chr2:4003411 1.17E-122 dispersed
Car02g00512 Car-Chr2:4003411 Car20g00275 Car-Chr20:1595226 0 wgd
Car02g00512 Car-Chr2:4003411 Car03g00275 Car-Chr3:3923870 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88645 PF00069 Pkinase 2.70E-72 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00512 - K12761 csv:101204001 699.893