Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00544 ATGGCGCCAACAGCCACCGGATCCTTCTGCAACAAATTCCTTGCACTTTTACTTCTAATTCTCCACGTCGGCTGCTTTCTTTTAACCAATGGTGACAACCGCCGCCGCCGCCACCGTCCCCTGCAGCCGAAGAAGCGTAATGAATCTCCTCCGACGGCGTTGAGTCTGAAGCCGCAAAAAGCCCTAACCTCATCCATTTCATTTCTCAAACGAATTTTTTCTTCCAAAACGTGCAAAATGGCAATCGAGACGGCTCGTCCTCCCTCGACTCCGGCTCAATCGTCGCAGCATTCGATCGTCACGCTTATTCCTCAGCCGGTGGATACTCCGAACTCCAAGAACGCTAATCCGATCGATTCTGCTGGAACGCCACAGGATTCCGATATCACTACGGCGGAGATCAACCAATTTTTCCCCCTTCGTAACGATATCTTCCCCTGCACTGCTTGCGGCGAGATTTTCCCCAAGCCTCAATTGCTCGAACAGCACCAAGCGGCTAAACACGCCGTGTCGGAGCTTGCAGACTCGGATTCCGGTAAGAATATTGTTCGGATCATTTTCGAAACCGGATGGACGAGTAGAGAAAAAAGCCCGAAGATCATCCGAATCTTGAAAATCCACAACAGTCAAAAGATTCTCTCCAGATTCGAGGAATATAGAGAGTCGGTGAAGGCTAAAGCGGCCCGAAACGGCGGCGCTGTAAAGCGATGGGATGAACGGTGCATCGCCGATGGGAACGAGCTTCTGAGATTTCACTGTTCGACGTTTTTGTGCGATTTGGGGCAAAACGGTAATTCCAGCATCTGCGGGCAGCAATTTTGTAGTATTTGTGGGATAATCAAATCGGGATTCTCACACAAGTTGGATGGAATTTCTACGCTATCAAGTAGCTGGAGAGCACACGTGGCAATCCCTGAGGACATCGAAGAGGAGTTCAAGTTCATGAACGTGAAACGGGCGATTCTGGTTTGCCGGGTCGTGGCCGGCCGGATCGGGTCCGACAGCGACGAGCCGGAGAAAGATGGGGGCGGGTTTGATTCCGTAGTCGGCCGAAGTGGGAGTGGGGCCCAGACGACGGTGGATGAAGAAGAGCTGTTGGTTTTCAATCCGAGGGCGGTGCTCCCCTGCTTCGCGATTGTGTACGAAGTCTGA 1152 52.08 MAPTATGSFCNKFLALLLLILHVGCFLLTNGDNRRRRHRPLQPKKRNESPPTALSLKPQKALTSSISFLKRIFSSKTCKMAIETARPPSTPAQSSQHSIVTLIPQPVDTPNSKNANPIDSAGTPQDSDITTAEINQFFPLRNDIFPCTACGEIFPKPQLLEQHQAAKHAVSELADSDSGKNIVRIIFETGWTSREKSPKIIRILKIHNSQKILSRFEEYRESVKAKAARNGGAVKRWDERCIADGNELLRFHCSTFLCDLGQNGNSSICGQQFCSICGIIKSGFSHKLDGISTLSSSWRAHVAIPEDIEEEFKFMNVKRAILVCRVVAGRIGSDSDEPEKDGGGFDSVVGRSGSGAQTTVDEEELLVFNPRAVLPCFAIVYEV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4240971 4242122 - Carg23845-RA Car02g00544 143030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00544 383 ProSitePatterns Zinc finger C2H2 type domain signature. 147 168 IPR013087 -
Car02g00544 383 MobiDBLite consensus disorder prediction 334 355 - -
Car02g00544 383 MobiDBLite consensus disorder prediction 34 59 - -
Car02g00544 383 ProSiteProfiles Zinc finger C2H2 type domain profile. 145 173 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00544 Car-Chr2:4240971 Car04g02261 Car-Chr4:18260093 1.51E-65 dispersed
Car02g00544 Car-Chr2:4240971 Car20g00310 Car-Chr20:1797606 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2981 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00544 - - csv:101205506 594.734