Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00572 ATGGATCCAAATCTCAACGGTTTTCCAGATCATGAAACAGATTATAACTCTGATTATCAGGCCCTCTTAACCCAATTACATGATCTCCCCAATCGTTCGATTGATGGGTTTAGATTAAACGATTGGCCTTCTTTACCCACTTCATATCCATACCCTGAATTCAATAACCCATCTCCAGATCATGTTCCCTTCATCCAGAATTCCCTTTTCCCGAGCGAGCCAGACCCTAATCAGTTTTCTTCGCCGTCAAGTGAGAGGGCGAAAGGGGAGCCACGTTCTGGGTCGGTGGGGTTGAACTCAGATGGAGGTGCAAAAGGGGTGGCTTTGGGGTTAAGCCCTGGTGGTGACTCTTCCTCAGATGAGAGTGACTTCAAGGAAACCGTTCTCAAGTACATAAGCCAAATGCTTATGGAAGAGAATTTGGAGGAGATGCCCTGCATGTTTTATGATCCTATGGGACTTAAAGTTACTGAGAAATCGTTCTATGACGCTCTTAGTGAGAACTACCCTCCTTCACCTAACCAACCTCCTCTGGATTGCGAGAGCTCTGAGGATCAATGGGCTGTTGATCCTGTAGAACATACGCCCCCTGTACTTCGAAGACCTTTTCCCAGTAATGAGTATCAGTCGAATTTTGAGGTTACTTCTGGCAATCAAAGCAACCTGATTACTAATAGTCATGAGTTCGCCACTGAGCTGTTGGCTCAGAATATCTTTAGTGATAGCACATCCATCTTGCAATATCAAAAAGGGTTGGAGGAGGCAAGGAAGTTTCTTCCAGGAGGTGAACAGCTGAATATTGATCTTGGCAGCAGCATACTGACAGGAGTGGCTTCTAAGGTAATGGATACAACAGAGAAGGTGAAAAGGGAGAATTCACCGAATGGATCGAAGGGACGGAAGAATCGGGAACGTGAAGATGTAGACTTAGATTCAGAAGAAGGGAGGAGAAACAAGCATGCCACCATTTATGGGGATGAGGAAGAATTATCTGAGATGTTTGATAAGGTTTTACTTCATGATTATGGAGGAAATGAGACCTCTGCAAATGGGAAATTGCAGTATAATGGACAACTTCATGGATCTATTGCTGGGAAAGCTGGGGAAAAGAAACAGGAGAAGAGAAAAGACTCAGTGGATTTGAGAAATCTTCTGATATTATGTGCACAAGCTGTGTCTTCTGATGATCGGAGGATTGCTAATGAACTACTTAAGAAGATTAGGCAGCATTCTACAACCAATGGGGATGGTTTCCAAAGAATGGCTCATTTTTTTGCTAACGCTCTTGAGGCTCGCATGGTTGGCACTGGTACAGGAAGCATAATCCACTATGAATCACTAATTCAAAGCAAGATTTCAGCGGCTGATATGTTAAAAGCTTACCAAGCACACTTATCATCCTGCCCTTTTAAGAAACTCTCGCTTTTTTTCATGGTTAAAATGATTTTGAAGGTTGCTGATAAGGCCAAAAGTCTTCATATTATTGATTTTGGCATTTGCTATGGCTTCCTCTGGCCAATGTTAATTCAGTTTCTTTCACAATTACCTGATGGTCCACCTAAACTACGCATTACTGGTATTGATCACCCTCTACCAGGATTTCGTCCAGCCGAAAAGATTGATGAGTCAGGACGTCGTTTGGCAAAATACTGCAAACGCTTTACCGTTCCTTTTCAATATCAAGCCATAGCATCAGAAAACTGGGAAACTATCCGAATCGAGGACTTCAAGCTCGATAGCAGTGACGTGCTAGTTGTGAACTGTTTCTACAGGTTTAACAACCTACTCGACGAAACTGTCGAAGAAACTAGTCCAAGGGATATTGTTCTACGTCTAGTAAGGGAGATGAATCCAAACCTATTTGTACATTCTATCACTAATGGATCCTATCATGCACCGTTCTTCATAACGCGCTTTCGAGAGGCACTCTTCCACTTCTCTGCACTGTATGATTCCTTAGACGTTAATTTACCTCGTGAAAGTGAAGAGAGGATGATGATAGAAAGAGAGTATCTCGGGCGTCAAATCATGAACGTAGTAGCATGTGAGGGTGCTCAGAGGGTTGAGAGGCCTGAAACCTATAAGCAATGGCAGGTTCGGTGTATTAGGGCGGGTTTCAGGCAGCTTCCTTTGGACAAGGAGATGATGAACAAGTTTAGGAGCAAGCTAACAACCCATTACCACAAAGATTTTGTACTGGATGAAGACAATGGCTGGATACTTCAAGGGTGGAAAGGCCGTATTGTCTATGCTTCTTGTTGTTGGGTGCCAGCATCATAG 2280 43.38 MDPNLNGFPDHETDYNSDYQALLTQLHDLPNRSIDGFRLNDWPSLPTSYPYPEFNNPSPDHVPFIQNSLFPSEPDPNQFSSPSSERAKGEPRSGSVGLNSDGGAKGVALGLSPGGDSSSDESDFKETVLKYISQMLMEENLEEMPCMFYDPMGLKVTEKSFYDALSENYPPSPNQPPLDCESSEDQWAVDPVEHTPPVLRRPFPSNEYQSNFEVTSGNQSNLITNSHEFATELLAQNIFSDSTSILQYQKGLEEARKFLPGGEQLNIDLGSSILTGVASKVMDTTEKVKRENSPNGSKGRKNREREDVDLDSEEGRRNKHATIYGDEEELSEMFDKVLLHDYGGNETSANGKLQYNGQLHGSIAGKAGEKKQEKRKDSVDLRNLLILCAQAVSSDDRRIANELLKKIRQHSTTNGDGFQRMAHFFANALEARMVGTGTGSIIHYESLIQSKISAADMLKAYQAHLSSCPFKKLSLFFMVKMILKVADKAKSLHIIDFGICYGFLWPMLIQFLSQLPDGPPKLRITGIDHPLPGFRPAEKIDESGRRLAKYCKRFTVPFQYQAIASENWETIRIEDFKLDSSDVLVVNCFYRFNNLLDETVEETSPRDIVLRLVREMNPNLFVHSITNGSYHAPFFITRFREALFHFSALYDSLDVNLPRESEERMMIEREYLGRQIMNVVACEGAQRVERPETYKQWQVRCIRAGFRQLPLDKEMMNKFRSKLTTHYHKDFVLDEDNGWILQGWKGRIVYASCCWVPAS 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4374846 4377125 - Carg20301-RA Car02g00572 143058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00572 759 Pfam GRAS domain family 381 755 IPR005202 -
Car02g00572 759 MobiDBLite consensus disorder prediction 50 123 - -
Car02g00572 759 ProSiteProfiles GRAS family profile. 372 756 IPR005202 -
Car02g00572 759 MobiDBLite consensus disorder prediction 60 88 - -
Car02g00572 759 MobiDBLite consensus disorder prediction 284 318 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00572 Car20g00340 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00572 Car-Chr2:4374846 Car01g00889 Car-Chr1:8233682 9.74E-64 dispersed
Car01g00558 Car-Chr1:3292228 Car02g00572 Car-Chr2:4374846 0 wgd
Car13g00086 Car-Chr13:634221 Car02g00572 Car-Chr2:4374846 0 wgd
Car14g00115 Car-Chr14:563954 Car02g00572 Car-Chr2:4374846 0 wgd
Car02g00572 Car-Chr2:4374846 Car20g00340 Car-Chr20:1938505 0 wgd
Car02g00572 Car-Chr2:4374846 Car06g00255 Car-Chr6:1446580 4.29E-10 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2984 PF03514 GRAS 1.80E-104 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00572 - - mcha:111017073 1191.79