Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00580 ATGGGTAACGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGAATCAACGACGGTAGGCGGCGGCCGGATATTTCTTCTCTGTTATCGAATCCACTCGATGAAGGGCTTGGACACTCGTTCTGCTATGTCCGGCCGGATCCTTTGAGGCTGTCGTCTTCAAAAGTTCATTCCGATGAAACCACCACTTTCCGATCAATTTCCGGCGCCTCTGTAAGTGCCAATACATCGACGCCTCTTTCTACGGCCCTTGTTGATCTGTATTCGTACAATAGCATTGATCGAGCGGCGGCTTTTGAGAGTTCGACTTCTTTCGCTTCAATTCCTTTGCAGCCGATCCCTAAAAACATGATCAATTCGGGTCCGATTCCGGGTAATTTCAGTGGAATCCCTAGTTCGGGTCCTTTGGAAAGAGGGTTTTTATCGGGTCCAATTGAACGAGGGTTTATGTCGGGTCCATTGGATCGGGGGATTTTTTCGGGTCCTCTTGATAATTCTACATCTTGCGAATTTCAGAGAAGTTTCTCTCATGGTGGAGGATTTAATTCCAGATCTGGATCGAGAAAAGGCCGGCTAATTCGGATTTTGAGAAGCGTAATTTCGAAGTCGATTTATCGAGGGCAAAATTCCATTGTGGCTCCGATTAAAGCGGTTAAAGAACCCGATTGGATCGTCATGCCCGAGAAACATAATGAGAATTTGACTGTAAGTAGTTTAAATTTCAGTAGTGAGGGAAGTTTGGAAGACGATGATTCAATGGAGAGCCAAAATCTGCAGTGGGCTCAAGGAAAAGCAGGGGAAGATCGTGTTCATGTGGTTGTTTCGGAAGAACATGGTTGGGTTTTCGTCGGGATTTACGATGGATTTAACGGTCCTGATGCTCCTGATTACCTTTTATCGAATCTATACTCCTTTGTTCATAAGGAACTTAAAGGTTTGTTATGGGACGAAAAGCTCGATTCCGCCGGAGTTGCCGCTCCGGCCACTTCCCCTGTTCGATCTGAGAATCATCCTTGTCCAGAAACAAGAGATTGTTCGCAGGTTAACGCTTGTTCTCAGTGTGTTGAACAAGAGAATCATCCTTGTGCTAGTGGCGATGCGAATTCTGGATCGAATTCGAGGAGAAAAAAAGGTAAGAATTCAAGAGGAAAGTTTAAAGGAGCTTCTGAGAAATGGGAGGATAATCAGCGGAAATGGAAGTGCGAATGGGATCAGGAACGATTAGAGCTCGATCGGAGGTTAAAGGAGCAGTTGAATCGATCTGCGTCGTTGAATGGTTCGAGGTCGATTAATCATTCGGATGTTTTGAAAGCTTTGTCCCAGGCATTGAAGAAAACAGAGGAGGCCTATTTGGATATTGCAGACAAGATGCTCGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTGCTTGTGATGCTTATGAAGGGAGATGATGTTTATGTGATGAACGTTGGCGATAGCCGAGCTGTTTTAGCGCAGAAGGCGGAGCCCGATTATTGGCTCGGGAAGATTCAACAGGATTTGGAGAGGATTAATGAAGAGCCAGTTCATGACATTGAAGCATTAGATGGAGATAGAGCATTCACATCAGCTAACCTTACTGCTTTTCAGCTTTCCATGGATCATAGCACCAGCGTTGATGAGGAAGTTCAGAGAATAAAAAATGAACATCCTGATGATGCTGGTGCCGTGATGAACGACCGTGTGAAAGGCTCGTTGAAGGTTACTCGGGCGTTCGGTGCTGGGTTCCTCAAACAGCCTAAATGGAACAATGCACTGTTGGAAATGTTCAGAATCAACTACGTCGGGGGATCGCCATACATCAATTGTCTTCCATCTCTCTACCACCACAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGACTCTACCAGTACTTCACAAACGAGGAAGCTGTTTCGGAAGTCGAACTTTTCATCGCCTTGCAACCCGAAGGAGACCCGGCACAACATCTGGTTGAACTACTGCTGTTTCGGGCTGCAAAGAGAGCTGGTATGGATTTCCACGAGTTACTCAAAATACCACAGGGCGATCGGAGGAAGTACCACGACGATGTATCGATCATTGTAATTTCATTAGAAGGGAGGATCTGGAGATCCTGTGTATAA 2142 45.8 MGNGIGKLGVCFTGINDGRRRPDISSLLSNPLDEGLGHSFCYVRPDPLRLSSSKVHSDETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPKNMINSGPIPGNFSGIPSSGPLERGFLSGPIERGFMSGPLDRGIFSGPLDNSTSCEFQRSFSHGGGFNSRSGSRKGRLIRILRSVISKSIYRGQNSIVAPIKAVKEPDWIVMPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSFVHKELKGLLWDEKLDSAGVAAPATSPVRSENHPCPETRDCSQVNACSQCVEQENHPCASGDANSGSNSRRKKGKNSRGKFKGASEKWEDNQRKWKCEWDQERLELDRRLKEQLNRSASLNGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIQQDLERINEEPVHDIEALDGDRAFTSANLTAFQLSMDHSTSVDEEVQRIKNEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRINYVGGSPYINCLPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFIALQPEGDPAQHLVELLLFRAAKRAGMDFHELLKIPQGDRRKYHDDVSIIVISLEGRIWRSCV 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4427611 4430340 + Carg20293-RA Car02g00580 143066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00580 713 Coils Coil 435 455 - -
Car02g00580 713 ProSiteProfiles PPM-type phosphatase domain profile. 249 704 IPR001932 -
Car02g00580 713 MobiDBLite consensus disorder prediction 359 388 - -
Car02g00580 713 Pfam Protein phosphatase 2C 413 653 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00580 Car20g00353 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00580 Car-Chr2:4427611 Car16g01017 Car-Chr16:8658307 5.73E-146 dispersed
Car02g00580 Car-Chr2:4427611 Car20g00353 Car-Chr20:1990725 0 wgd
Car02g00580 Car-Chr2:4427611 Car03g00373 Car-Chr3:4557480 0 wgd
Car02g00580 Car-Chr2:4427611 Car07g00975 Car-Chr7:5534797 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00580 - - csv:101222644 1309.66