Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00597 ATGAAGCCATCATTTTCGTCCAATTTCGTCGCCGGAGTAGCCTTGCCGGAACCCTGCTGTGTCGAAACCCATTTTGAAGCTTCTCCGCGAGTACTTCGAACTAGAAGAAGAATCGAAATGAACGAAGGATTTTGGATTACGAAGGGTCTGGGGCATGAAAATGATTCACATTCAAATTTTGGCAGCCCTTCATTATCAGACACAAAACGAGCACGTCACTGGTTTATGGATGGTTGTGAGACGCAGGTTTTCCCGAACAAGAAGCAAGCAATTCAAGCTCCAAATAGTAAAATGACAGGAATTCTGTCAAATGTGAATGTTCTTCATTGGGAGCAGCATACTGATAATTATCAATCTGTTTCACATCGACTTATTGGTTGCGTATTCGGACCCGAATCACTAAGGTCTGCTGACTTACCTCTAACAAAAACATCTTCTGTAATTCCTGATAATTTTGATCTCAGGAGAAAAGGTGTGGAAGACCAATATGGAGATGATGCATCTATATCTCATGGGTTGGAGGATCAGGTTAAAGATAATGTACATGATCTGCAACCATGTCCAAGAAGTAATTCTAATAGGGACGATGACGGTCAACTAGCAATAGAAGGTCGTCACTACAAGGAAATTGAAACGGATCTCGTATCGATGGGATCGGCCTATATTAAGGAGGATGACAGCTTCAGTTTGATAAATCAAACTGCCAATGATGGGGATCACCATTTTGGGTTACTAGATCATAGAGGGAAGATAGACGACAATGTTGTCTCCATTGATGATGATTACGGTAAGCAGGATCCAAATATAATCTCGTTTGGAGAATTTCCTGATGAGCAAGATATCATCCCCTTAGGCAGGTCTCTTGGAAGCCACGACTCGACATTCTACGAATCTTCATTCCAACCATCTGAAGTTGTTGGTGTCACTGATTTGGAACCGTCAAATTTTGATGTAGTTGTAAGCAGTCCTCAGATAGCTAAGCAAAAGCCTTATAGGACACCAAAGAGTAGACCAGACTACAAAACAAGGAAAGAAGCTCCAAACATCTTCCCTTCGAATGTTCGAAGTTTGATATCAACGGGTATGCTCGATGGCGTTCCTGTGAAGTATGTTTCTATAGCTAGAGAGTGGCTTCGTGGAATTATAAGGCGATCTGGGTATCTTTGTGGATGCCAATCTTGCAACTTTTCCAAGATGCTTAATGCGTATGAGTTTGAGCGGCATGCTGGCTGCAAAACAAAACACCCAAATAATCATATATACTTCGAGAATGGGAAAACTATTTACCAGATAGTACAAGAACTAAGAAGCACTCCGGAGAGCTTGTTGTTTGATACAATTCAAACCATCTTCGGTGCACCGATCAATCAGAAATCTTTTCGGATTTGGAAAGAATCGTTTCAAGCAGCTACCCGTGAGCTTCAGTGCATATATGGGAAGGATGAACTTAGCCTTCAGTAG 1461 41.75 MKPSFSSNFVAGVALPEPCCVETHFEASPRVLRTRRRIEMNEGFWITKGLGHENDSHSNFGSPSLSDTKRARHWFMDGCETQVFPNKKQAIQAPNSKMTGILSNVNVLHWEQHTDNYQSVSHRLIGCVFGPESLRSADLPLTKTSSVIPDNFDLRRKGVEDQYGDDASISHGLEDQVKDNVHDLQPCPRSNSNRDDDGQLAIEGRHYKEIETDLVSMGSAYIKEDDSFSLINQTANDGDHHFGLLDHRGKIDDNVVSIDDDYGKQDPNIISFGEFPDEQDIIPLGRSLGSHDSTFYESSFQPSEVVGVTDLEPSNFDVVVSSPQIAKQKPYRTPKSRPDYKTRKEAPNIFPSNVRSLISTGMLDGVPVKYVSIAREWLRGIIRRSGYLCGCQSCNFSKMLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTIFGAPINQKSFRIWKESFQAATRELQCIYGKDELSLQ 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4517071 4520060 - Carg20276-RA Car02g00597 143083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00597 486 Pfam Tify domain binding domain 380 435 IPR032308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00597 Car20g00370 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00597 Car-Chr2:4517071 Car06g00270 Car-Chr6:1526693 3.16E-40 dispersed
Car14g00139 Car-Chr14:648141 Car02g00597 Car-Chr2:4517071 6.74E-41 wgd
Car02g00597 Car-Chr2:4517071 Car20g00370 Car-Chr20:2061582 0 wgd
Car02g00597 Car-Chr2:4517071 Car04g00208 Car-Chr4:1159173 1.78E-20 wgd
Car02g00597 Car-Chr2:4517071 Car04g01102 Car-Chr4:6347091 6.25E-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00597 - - cpep:111794439 877.47