Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00610 ATGGATTCTAGAAGAAGATTTGGATTACTCCTCTGGGGTGGTTTGTTGATTTCGTTGTTTCCTTACATTTCTTGTTTGTTTAATCCGGTAGATAATTATCTCATTGACTGTGGATCTTCGGGGAATGTGTCTGTGGGTAATCGTGTTTTCATGGCCGATAATTCGGCTTCAAATTTGCTTTCCACTCCAGAAATCATTTCGGCTAATACATCTTCAGTTCCTGCCTCTTCTTCTAACGATTCATCGCTGTTCGAAACTGCTAGAATCTTTACTGGAACATCAAAATTCACGTTTCCAATAAAGAAAACCGGAAGGCATTGGATCCGCCTCTATTTCTATCCATTTGTGTTTTCTAGCTTCAATATGAGTGCTGCAAATTTCAGTGTTTCAACTCAAAACTTTGTTCTGCTGAGAGATTTGGTTGTAGAGAAGGATCCCATAGTCAAAGAATTCTCTGTGGATGTAAAATCAGATACTCTTGAAGTTATCTTTGCTCCTGTTAATGGCTCCATTGCATATGTGAACGCCATTGAAGTTGTTTCTGTTCCTGACATTCTCATTGTTGATGAAGCCACTTTGTTAGAACCATCTGGTAAATTTCAAGGGCTGACTACTCTAGCATATGAGACTGTTGCTAGAGTTAATGTGGGTGGCCCAAAAGTTGCTCCTGATAAAGATCCTCTTACACGGAATTGGGTTTCTGATGGAAGCTTTCTAGTAAATAAGAATTCTGCAACAAGTTTCTCGAACATTCCCGCTGTTAAATACAGCCCTGAAGGCGCAGCGCCGGAGATTGCTCCAAATGTTGTCTATGGTACTCTCATGGAGATGAACTCGAAGGACGATCCAAACAGTAACTTCAATGTGACATGGAAGTTTAAAGTCGATCCCGAGTTTCAGTATCTTGTTCGGTTTCACTTCTGTGACATTGTGAGCAAATCTCTACACCAACTTTATTTCAATGTTTATGTCGACTCATGGCTGGTTGTTCGGGATCTGGATCTTAGTGTTCGACTTTCTAATGCTCTGGGCACTCCATACTATATGGACTCTGTTACAGGATTGATCAAGAATGACATACTTCTTGTGAGTATTGGCCCAGCAAACTTAGCCAATGTGTATCCAAATGCCATTCTAAATGGTCTGGAAATCATGAAAATGAGCAACTCTGTTGGCAGTCTCAGCGGGGAAGACTCTGTAATTAGTTTTCCAGGCTCGACTTCTTCAAATAAGCATGTTGGCGTCATTATCGGTGTGGTTATTGGGGTATTTGTTGCAGCTATATTGGCTGGCGTTCTTTTCGTGCTGTGCAGACGAAAAAGAAAGGGAATGCATCAGGCCCCGACGAAATCGTGGATTTCGATATCCACAGCTGGAGGAATGTCACACACTATGGGAAGTAAATACTCTAATGGCACGATCACAAGTGCTGCTTCCAACTACGGGTATCGAATACCTTTTGCAACAGTTCAAGAGGCTACAAATAACTTCGATGAGAGCTGGGTTATTGGTATTGGCGGGTTCGGGAAAGTATACAAGGGAGTATTGAATGATGGCACCAAAATTGCTGCAAAGAGGGGTAATCCACGTTCCCAACAAGGATTGGCCGAGTTTCAAACTGAAATCGAGATGCTGTCACAGTTTCGTCATCGTCATCTCGTTTCATTGATTGGTTACTGTGATGAGAGGAATGAGATGATACTGATTTATGAGTACATGGAACAAGGCACCCTGAAGAGTCATCTATATGGTTCTGATTTTCCTAGTTTGAGCTGGAAAGAGAGACTTGAGGTCTGCATTGGAGCCGCTAGAGGACTTCATTACCTCCATACTGGTTATGCCAAACCGGTTATTCATCGTGACGTGAAGTCCGCTAATATTTTACTCGACGAAAACCTCATGGCGAAGGTTGCAGACTTCGGGCTTTCGAAGACGGGTCCTGATCTAGACCAAACCCATGTCAGTACTGCTGTGAAAGGGAGTTTTGGGTACCTCGATCCTGAATATTTCAGGAGGCAACAACTGACAGAGAAATCAGATGTTTATTCATTTGGAGTTGTTTTGTTTGAAGTTCTTTGTGCAAGACCTGTCATAGATCCAACCCTTCCTAGAGAAATGGTAAACTTAGCTGAATGGGCAATGAAATGGCAGAAGAAAGGGCAGTTGGATCAAATCATTGATTCTACTCTTGTAGGTAAAATTAGAGCAACTTCTCTTAGGAAGTTTGGTGAAACTGCTGAAAAATGCTTGGCTGACTATGGAGTCGACCGGCCATCCATGGGAGACGTCTTGTGGAACTTGGAGTATGCTCTTCAGCTACAAGAAGCCATTATCGAAGTCGATCCAGAAGATAACAGTACTAATATGATCGGCGAGCTCTCTCCACAAATTAACAACTTCAATGATATCGAAACAGGTGCTTCTGCTACACGGTTTGACGTTCCAGGCGTGGATGATCTTTCTGGAGTTTCCATGAGTAGGGTGTTCTCTCAGCTGGTGAAATCTGAGGGTCGATGA 2517 42.55 MDSRRRFGLLLWGGLLISLFPYISCLFNPVDNYLIDCGSSGNVSVGNRVFMADNSASNLLSTPEIISANTSSVPASSSNDSSLFETARIFTGTSKFTFPIKKTGRHWIRLYFYPFVFSSFNMSAANFSVSTQNFVLLRDLVVEKDPIVKEFSVDVKSDTLEVIFAPVNGSIAYVNAIEVVSVPDILIVDEATLLEPSGKFQGLTTLAYETVARVNVGGPKVAPDKDPLTRNWVSDGSFLVNKNSATSFSNIPAVKYSPEGAAPEIAPNVVYGTLMEMNSKDDPNSNFNVTWKFKVDPEFQYLVRFHFCDIVSKSLHQLYFNVYVDSWLVVRDLDLSVRLSNALGTPYYMDSVTGLIKNDILLVSIGPANLANVYPNAILNGLEIMKMSNSVGSLSGEDSVISFPGSTSSNKHVGVIIGVVIGVFVAAILAGVLFVLCRRKRKGMHQAPTKSWISISTAGGMSHTMGSKYSNGTITSAASNYGYRIPFATVQEATNNFDESWVIGIGGFGKVYKGVLNDGTKIAAKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEQGTLKSHLYGSDFPSLSWKERLEVCIGAARGLHYLHTGYAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDSTLVGKIRATSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAIIEVDPEDNSTNMIGELSPQINNFNDIETGASATRFDVPGVDDLSGVSMSRVFSQLVKSEGR 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4609613 4612129 + Carg20262-RA Car02g00610 143096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00610 838 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Car02g00610 838 Pfam Malectin-like domain 35 387 IPR024788 -
Car02g00610 838 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00610 838 Pfam Protein tyrosine and serine/threonine kinase 502 696 IPR001245 GO:0004672|GO:0006468
Car02g00610 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01013 Car-Chr1:9662947 Car02g00610 Car-Chr2:4609613 0 dispersed
Car02g00610 Car-Chr2:4609613 Car09g00807 Car-Chr9:4886675 0 dispersed
Car02g00610 Car-Chr2:4609613 Car20g00382 Car-Chr20:2130744 4.75E-09 wgd
Car02g00610 Car-Chr2:4609613 Car04g00230 Car-Chr4:1279295 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88653 PF12819 Malectin_like 1.60E-32 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00610 - - csv:101218488 1410.97