Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00624 ATGAGGTTAGGGTGGAATGTGAAATCCCACATCACATCAGTTGAAGAAGGAAACGAAACCTTCTTTATTACAAGGGTGTATATAGTGTATTTAGGGCACACCCGTCTCGAGGATGCAACTTTGACCTCCGAATCCCATCTTCGTTTGCTCTCTAAAGTATTTGCGAGTGAAGAAGATGGTAAACGAGCCATGTTGTATAGCTACAAGCGTAGCTTTTCTGGGTTCTCCGCGAAGCTTAATGCAAGCCAAGCAATGACGTTATCGAAGATGGAAGGAGTGATATCCATATTCAAGAGTAAAACTATGGAGCTCCACACAACAAGAAGTTGGGACTTCTTGGGGCTTCCCATTCCTTCGTATAGCGGAAGTAGGACGTTTGATACACCACGTTCGCGTAAGCTGGCCGATGGCGCCGACGTTGTTGTTGGCATCTTCGATTCAGGCATATGGCCTGAATCGGAAAGTTTCGAGGATGATCGGTGGATGTCCCCGGTTCCATGCAGTTGGAAGGGCAAATGCGTGAAAGCGTATAGATTCAACCCTTCATTAGCTTGCAATCGCAAGCTAATTGGCGCTCGTTACTATCTCAAAGGTTTCGAAGCCGAATACGGAGGACTCAACACAAGCGGGAACCCTGAGTTTGAATCGCCTCGAGACTTTTTGGGGCACGGGACTCATACAGCTTCAACAGCCGTGGGTGCCATTGTGGAGGACGTGAGCTTCACAGGGTCATCGTTAGGCAAAGGCATCGCTCGAGGAGGAGCGCCATGGGCTAGGTTGGCTGTGTACAAGGTGTGCTGGGGAAAGGACTACGAAGGGAAGTGCACGGATGCAGACGTGATGGCTGCGTTTGACGACGCTTTGTGCGATGGAGTCGATGTTATTTCAGCGTCGTTCGGAGGGTCGCCGCCGTTGGCTCCATTTTTCGAGTCTAGTAGTGCGATTGGGTCGTTCCATGGCATGCAGAAGGGAGTAAGTGTTGTGTTCTCAGCTGGTAACGATGGACCTTATCGTTCACTCGTTCAAAATGTGTCTCCGTGGAGCATTTGTGTTGCTGCTTCAACTATGGATCGAACCTTTCCCACTCAAATTCTCATCCAAAACAGGATCTCTATTATGGGTGAGAGCTTGATCACTACAAACATAATTAACGCAAAATTAGCGAATGCGATCAACTATTTTATAGACGGAGTTTGCGAGCGGCGAAGTATAAGGAAAGATAGGAAATCGGGGGCAGGGAAAGTGGTGGTTTGTTTCTCCACGGCAGGCCCAGTTTCGATGGGGGATGCACAACAAGCGCTGAACGCCATCAATGCCTCGGCTTTGATATTTGGTGCGCCGCCCACGCTGCAGCTCCCTGACCTTGATCTCCTCCCCACCGTTCGAATTGACATTACCCACGCAACTCAAATTAGAAACTTTCTTGCTGAACTGCCCAGGCTGCCAGTAGTAGAGATCAGGGCTGCAAGAAGCGTGATTGGGAAGTCGGTGGCTCCGAGTGTGGCATACTTCTCGTCTAGAGGACCGAGCTCACTTTCGCCTGACATACTTAAGCCAGACATAAGTGCCCCAGGAGTGAACATATTGGCGGCATGGCCTCCAGAAACTGCCCCAACAGTGCGGCCAACATCGACAGAAGGAGAAAGCCAAAGGCAAGTCAAATGGAATTTCCAATCAGGGACTTCAATGTCATGCCCTCACATCTCTGGAGTCGTTGCCCTCATCAAATCTCTGCATCCAAGCTGGTCTCCTGCAGCCATTAGATCTGCCCTCGTCACCACAGCCACCAAGAAGGACTCCACTCGCAACACCATCCTAGCAGGTGGATCCACGAAACCATCCGATCCATTCGACATTGGAGGTGGCCAAGTGAACCCATTGAAGGCAGTAAATCCAGGACTAGTGTACGACATGACAGCCAATGATTACATTATTTTTCTCTGCAATATTGGGTACACAGAGCAGCAAATCAGGATGATTGTGAACCCTTCTCCACAAACACTTGTTTGTTGTCCACCATTTCTATCCACCTCCGTTGCCAATCTCAATTATCCTTCCATTACACTTGCAAACCTCAAATCCACAACCACAATCAAAAGGACTGTTCGTAATGTAGCAGCAAACAAAAATGCCATCTACTTTCTTAAGCTGAATCCTCCCAATGGAGTGCAAGTATTGGTATGGCCTCGGATTCTTCTTTTCTCTTGGTTTAGGCAGCACGTTTCTTACTACATCACCATAACCCCGCTCAAGAAAGCTCGTGGGAGGTATGATTTTGGGGAGATTGAATGGTCAGATGGGTTCCATAGGGTCACAAGTCCTCTGGTTGTTCGTGTTAGCAGCGCTAGCTAG 2352 48.81 MRLGWNVKSHITSVEEGNETFFITRVYIVYLGHTRLEDATLTSESHLRLLSKVFASEEDGKRAMLYSYKRSFSGFSAKLNASQAMTLSKMEGVISIFKSKTMELHTTRSWDFLGLPIPSYSGSRTFDTPRSRKLADGADVVVGIFDSGIWPESESFEDDRWMSPVPCSWKGKCVKAYRFNPSLACNRKLIGARYYLKGFEAEYGGLNTSGNPEFESPRDFLGHGTHTASTAVGAIVEDVSFTGSSLGKGIARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALCDGVDVISASFGGSPPLAPFFESSSAIGSFHGMQKGVSVVFSAGNDGPYRSLVQNVSPWSICVAASTMDRTFPTQILIQNRISIMGESLITTNIINAKLANAINYFIDGVCERRSIRKDRKSGAGKVVVCFSTAGPVSMGDAQQALNAINASALIFGAPPTLQLPDLDLLPTVRIDITHATQIRNFLAELPRLPVVEIRAARSVIGKSVAPSVAYFSSRGPSSLSPDILKPDISAPGVNILAAWPPETAPTVRPTSTEGESQRQVKWNFQSGTSMSCPHISGVVALIKSLHPSWSPAAIRSALVTTATKKDSTRNTILAGGSTKPSDPFDIGGGQVNPLKAVNPGLVYDMTANDYIIFLCNIGYTEQQIRMIVNPSPQTLVCCPPFLSTSVANLNYPSITLANLKSTTTIKRTVRNVAANKNAIYFLKLNPPNGVQVLVWPRILLFSWFRQHVSYYITITPLKKARGRYDFGEIEWSDGFHRVTSPLVVRVSSAS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4706959 4711306 + Carg20247-RA Car02g00624 143110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00624 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Car02g00624 783 ProSiteProfiles Serine proteases, subtilase domain profile. 109 630 - -
Car02g00624 783 Pfam Peptidase inhibitor I9 26 105 IPR010259 -
Car02g00624 783 Pfam Fibronectin type-III domain 681 777 IPR041469 -
Car02g00624 783 Pfam Subtilase family 137 600 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00624 Car-Chr2:4706959 Car16g00018 Car-Chr16:203184 1.10E-172 dispersed
Car02g00624 Car-Chr2:4706959 Car02g01468 Car-Chr2:9579646 2.79E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00624 - - csv:101206755 1144.41