Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00632 ATGGAAGGAAGTGATTCAATCATCACTGTTTCGTCTACTCCACTATCTCAATCTCCTTCTTCTTCTTCTTCTCCCGCTTCACCGCCGCCTCTCGTTCTCAGTCCTTGTGCGGCCTGCAAGATTTTGAGGCGGCGATGTGCCGGACGATGTGTATTGGCGCCCTATTTCCCTCCCACTGAGCCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCGAGTAATATCATTAAATGCTTGCAGGAACTGCCTGAATCACAAAGGGCGGATGCAGTGAGCAGCATGGTTTATGAAGCAAATGCGAGGATCAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCATTGATCTTCAAGCGCAGCTAGCGAAGGCTCAGGCTGAGCTTGTCAACATGGAATGCCAACAAGCCAATCTGGTGGCCTTCGTTTGCAGGGAATTGGCTCAGTCTCACCCCCAGTGTTTTGATGATTTCAATGCCAGCCCTCACAGCGGCTTCCATAGCATCACCCAAACAAACTTCGATGATTATAGCAATGTAAACCAACTATGGGAACCACTCTGGACATGA 588 50.0 MEGSDSIITVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQVIDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNFDDYSNVNQLWEPLWT 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4759375 4760604 + Carg20239-RA Car02g00632 143118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00632 195 MobiDBLite consensus disorder prediction 1 30 - -
Car02g00632 195 MobiDBLite consensus disorder prediction 1 22 - -
Car02g00632 195 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Car02g00632 195 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
Car02g00632 195 Coils Coil 121 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00632 Car-Chr2:4759375 Car04g01337 Car-Chr4:7754472 5.80E-73 dispersed
Car01g00485 Car-Chr1:2847884 Car02g00632 Car-Chr2:4759375 1.41E-72 wgd
Car13g00164 Car-Chr13:1477601 Car02g00632 Car-Chr2:4759375 1.50E-71 wgd
Car02g00632 Car-Chr2:4759375 Car20g00407 Car-Chr20:2301707 2.64E-97 wgd
Car02g00632 Car-Chr2:4759375 Car04g00252 Car-Chr4:1433576 2.99E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2991 PF03195 LOB 1.30E-39 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00632 - - csv:101215067 276.559