Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00641 ATGGCCATGGCTATAGCTCATCACAGAGAGAGTAGTAGTGGGAGCTTAACCAGGCATCTTGACAGTACTGGAAAGTACGTTCGATACACATCAGAGCAGGTTGAGGCTCTTGAGCGAGTCTATGCTGAATGCCCAAAGCCAAGTTCTCTTCGAAGGCAGCAGCTCATCCGGGAATGCCCAATTCTTTCAAACATAGAGCCCAAACAGATCAAAGTTTGGTTTCAGAATCGGAGATGTAGGGAGAAGCAAAGGAAGGAGGCTTCTCGGCTGCAAACAGTGAACAGGAAATTGAATGCCATGAACAAATTGTTGATGGAGGAGAATGATCGGCTGCAGAAACAGGTGTCCCAATTGGTGTGTGAAAATGGGTTTATGCGGCAGCAATTACAAACAGTGCCAGCAGCAACCACTGATGCAAGCTGTGATTCTGTGGTCACCACTCCTCAACCCTCTAAAACAGATGCTAATAACCCAGCTGGGCTCCTCTCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCCATTTCACAAAGTTGCGGCGGAGTGGCAGCAAGAGCCTGTGGTCTTGTAAGTTTGGAGCCTGCAAAGATTGCAGAGATCCTTAAAGATCGTCCATCGTGGTTTCGTGATTGTCGAAGCCTTGAGGTTTTTACTATGTTTCCAGCTGGAAATGGTGGAACAATTGAACTTGTCTACACACAGGTATACGCTCCAACTACCCTTGCTCCTGCACGTGATTTTTGGACTCTGAGATACACAATAACTTTGGAAAATGGCAGCCTTGTGGTCTGTGAGAGATCTCTCTCGGGCTCTGGTGCTGGTCCTAGTCCAGCTGCTGCTGCTCAGTTTGTTAGAGCTGAGATGCTCCCAAGTGGTTATCTGATTCGACCATGTGAGGGCGGTGGGTCCATCATACATATAGTAGATCACCTAAATCTTGAGGCATGGAATGTTCCTGAGGTGCTGCGACCGCTTTATGAATCGTCGAAAGTCGTGGCTCAGAACATGACTATTGCAGCACTACGGTACGTTAGGCAAATAGCTCAGGAGACGAGCGGTGAAGTGGTTTATGGTTTGGGCCGACAACCTGCTGTTTTGCGAACCTTTAGCCAAAGATTGAGCAGGGGTTTTAATGATTTGGTGAATGGATTCAATGACAACGGATGGTCATTGATTAATTGTGAAGGTGCTGAGGATGTCGTACTTGCTGTGAATTCTACGAAAAATTTCGGCACGACATCCAATCCCGCGAACTCCTTAACGTACCCTGGGGGAGTTCTTTGTGCTAAGGCTTCCATGCTACTCCAAAATGTTCCTCCTGCCGTGCTAGTTCGTTTCTTGAGAGAACACCGTTCCGAATGGGCTGATTTCAACATTGATGCATACTCTGCAGCAACCCTTAAAGCTAATTCGTACGCATATCCAGGGATGAGGCCGACAAGGTTTACCGGGAGTCAAATCATCATGCCACTTGGCCATACAATCGAGCACGAAGAGTTGCTTGAAGTTATTCGTCTTGAAGGACATCCTATGGTACAAGAAGACGCTTTTGTTTCAAGGGACATTCATCTTCTTCAGATATGTAGTGGAATCAACGAGAACGCTGTAGGAGCTTGTTCAGAACTCATTTTTGCCCCGATCGATGAGATGTTTCCAGACGATGCCCCATTGCTGCCTTCTGGCTTTCGAATCATCCCATTGGATTCAAGAACAAGTGATGCTAAAGGTGCATTGACTACACAACGGACTCTCGATCTAACATCAAGTCTTGAAGTGGGTTCTGGAACAAGCAACGTTGCAGGAGATGCGTCGTCGAGTCAGTGCCCTCGATCCGTGTTAACTATTGCGTTCCAGTTTCCTTTCGAGAGCAGCATGCAGGATAACGTAATGAACATGGCACAGCAGTACGTACGTAGCGTCATTTCCTCGGTGCAGAGAGTTGCAATGGCCATATCTCCTTCTGGGGGCAGTCCCTCACTAGGTCCAAAGTTGTCTCCTGGTTCTCCAGAAGCTCTCACTCTAGCACATTGGATATGCAAGAGCTATAGTTTACAATTAGGAACGGAGTTGATCAGTTCAGATAGCTTGGAAAGCGATTCCCTTTTGAAAAATCTCTGGAATCATCAGGATGCGATATTGTGCTGTTCGTTAAAGCAGTCATTGCCTGTTTTCATGTTTGCAAACCAAGCTGGGCTCGACATGTTGGAGACAACTCTAGTAGCCTTACAAGACATCACATTGGATAAAATCTTCGACGAGGCGGGTCGTAAAGCTTTGTGTTCTGATTTTCCAAAGTTAATGCAGCAGGGATTTGCGTACTTACCTGGAGGAATCTGTGCATCGACAATGGGGCGACACGTTTCGTACGAACAAGCGATTGCATGGAAAGTCCTCGAGGCAGACGAGACGACGGTCCATTGCCTTGCCTTCTCCTTCATAAACTGGTCTTTTGTTTGA 2535 47.18 MAMAIAHHRESSSGSLTRHLDSTGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVCENGFMRQQLQTVPAATTDASCDSVVTTPQPSKTDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPAKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERSLSGSGAGPSPAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWNVPEVLRPLYESSKVVAQNMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDLVNGFNDNGWSLINCEGAEDVVLAVNSTKNFGTTSNPANSLTYPGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFNIDAYSAATLKANSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHPMVQEDAFVSRDIHLLQICSGINENAVGACSELIFAPIDEMFPDDAPLLPSGFRIIPLDSRTSDAKGALTTQRTLDLTSSLEVGSGTSNVAGDASSSQCPRSVLTIAFQFPFESSMQDNVMNMAQQYVRSVISSVQRVAMAISPSGGSPSLGPKLSPGSPEALTLAHWICKSYSLQLGTELISSDSLESDSLLKNLWNHQDAILCCSLKQSLPVFMFANQAGLDMLETTLVALQDITLDKIFDEAGRKALCSDFPKLMQQGFAYLPGGICASTMGRHVSYEQAIAWKVLEADETTVHCLAFSFINWSFV 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4832170 4837008 + Carg08582-RA Car02g00641 143127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00641 844 ProSiteProfiles START domain profile. 154 382 IPR002913 GO:0008289
Car02g00641 844 Coils Coil 80 121 - -
Car02g00641 844 Pfam Homeodomain 26 83 IPR001356 GO:0003677
Car02g00641 844 Pfam START domain 164 372 IPR002913 GO:0008289
Car02g00641 844 Pfam MEKHLA domain 699 843 IPR013978 -
Car02g00641 844 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00641 Car20g00428 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00641 Car-Chr2:4832170 Car08g00617 Car-Chr8:3969220 0 dispersed
Car12g00733 Car-Chr12:6939343 Car02g00641 Car-Chr2:4832170 0 transposed
Car20g00429 Car-Chr20:2411433 Car02g00641 Car-Chr2:4832170 7.66E-155 transposed
Car02g00641 Car-Chr2:4832170 Car20g00428 Car-Chr20:2406650 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2992 PF01852 START 1.50E-46 CL0209 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00641 K09338 - csv:101215773 1584.31