Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00648 GTTGACTACATTAGAACTGCAGCCAGAGGTTCATTTGGGGAGATCTTTATGGCTTATGGTAGTTCTAGATCCGTAAGATTCCAAGATGATCTTGAATCATCCACCCTGCCTACTATCAATGGTGGTGGCGTGAAGAAGATCATATACAACCTTGATGGCACACATATACCAGAATCGACGGCTTCCAGGAAGTCTGGAAGATCCTTGCGAGCTAAAGTTCTGTCTAGAGTTTTCTCTGAGGATTATGAGAGAGTGCAAAGAAAAATATTGGATCCTAGAGGACAAGCCATAAGGAGATGGAATAAAATCTTTTTAGTAGCTTGTTTAATCTCTTTGTTTGTAGACCCACTTTTCTTTTACTTGCCTGTCGTCCGGGATAACGTCTGCATTGATATAGGAGTAGGTCTCGAAGTCGTCCTCACAATTATAAGAACAATAGCTGATGTTTTCTACACAGTTCATATTCTCATTAAGTTTCGTACAGCTTATGTCGCGCCCTCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTTATAGACACTTGTAAGATAGCAGTGAGGTATCTACGGCATGGTTTCTGGATTGATTTCATTGCAGCCGTGCCAGTTCCTCAGGTACTGATATGGATTGTCATCCCCAACCTCAGTGGCTCAATAATGACAAACACCAAGAACTTTCTGCGGTTCTTTCTCATTTTCCAGTACATCCCAAGGCTTTTTCTCATATTTCCTCTCTCAACACAAATTGTTAAGGCCACTGGACTTGTGACACAGACAGCATGGGCTGGAGCTGCTTATAACCTGATCCTGTACATGTTGGCAAGCCATGTTCTAGGAGCTTGCTGGTACCTTCTTTCAATTGAGCGACAAGAAGCATGCTGGAGAACACTTTGTAAGTATGACAAATCTTGTAACAACGGATTCTTCGACTGTCATAAGATCGATGACCCTCAAAGGGGCTCGTGGTTTCGTATGAGCAACATCAAAAACACATGCAATCCAAATGATCCCTTTTATCAATTTGGTATATATGGTGATTCAATAACTTTCCATGTCACAACCTCAACGTTTTTCAACAAGTACTTCTACTGTCTTTGGTGGGGTCTGAAAAATCTCAGTTCCTTGGGACAAAATCTTGCCACAAGCACTTTTGTTGGGGAAATAGTTTTTGCCATAATTGTGGCAACTCTTGGACTGGTTCTGTTTGCATTGCTCATTGGCAATATGCAGAAATACCTCCAATCGACGACTGTCCGGTTAGAAGAGTGGAGAATAAGGAGAACTGATACAGAGCAATGGATGCATCACAGGCAGCTACCTCCAGAGCTCAGACAATCTGTCCGCAGATATGATCAGTATAAGTGGGTAGCAACTCGAGGAGTTGATGAAGAATCGCTGCTTAGAAGCCTTCCATTGGATCTCCGAAGAGACATAAAACGTCACCTCTGCCTCGATCTTGTTCGAAGGGTTCCATTGTTCGATCAAATGGATGAAAGAATGCTAGATGCCATATGCGAGAGACTTAAGCCTGCCTTGAGCACAGAAGGCACATTTCTGGTGCGAGAGGGCGATCCAGTCAATGAAATGCTATTCATAATCAGAGGACATCTCGATTCATACACCACTAATGGCGGCAGAACAGGATTCTTCAACTCCTGTTGTATCGGTCCAGGTGATTTCTGTGGTGAGGAGCTGCTAACATGGGCACTCGATCCTCGTCCCAGCGTTGTGCTTCCTTCTTCCACTCGCACGGTCAAAGCCATCTCAGAAGTAGAAGCATTTGCTCTCATAGCAGAGGATTTGAAATTCGTATCCTCCCAGTTCAGAAGACTCCACAGCAAACAACTCAGGCACAAGTTTCGATTCTACTCGCATCAATGGCGAACATGGGCTGCCTGCTTTGTTCAAGCTGCATGGCGGCGATATAAGAGACGCAAAGGAAGAGCCGAGCTCATGGCTAGAGAGAGGTATCCAGCTACCAACCTCGACTCGCCATTTTCACCACCAACTGCATCAAATTCGGATACATGTTCAGGAAACCCTAGAATAAGGATGAACAAGCGCTGTGTGTCGGATGCCGGGGTAGTAAGCTCACTGCAGAAGCCAGAAGAGCCCGACTTCTCCATTGTCGAGGAATGA 2136 44.71 VDYIRTAARGSFGEIFMAYGSSRSVRFQDDLESSTLPTINGGGVKKIIYNLDGTHIPESTASRKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQAIRRWNKIFLVACLISLFVDPLFFYLPVVRDNVCIDIGVGLEVVLTIIRTIADVFYTVHILIKFRTAYVAPSSRVFGRGELVIDTCKIAVRYLRHGFWIDFIAAVPVPQVLIWIVIPNLSGSIMTNTKNFLRFFLIFQYIPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRTLCKYDKSCNNGFFDCHKIDDPQRGSWFRMSNIKNTCNPNDPFYQFGIYGDSITFHVTTSTFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIVFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWVATRGVDEESLLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCCIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAFALIAEDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKGRAELMARERYPATNLDSPFSPPTASNSDTCSGNPRIRMNKRCVSDAGVVSSLQKPEEPDFSIVEE 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4882037 4885777 - Carg08575-RA Car02g00648 143134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00648 711 Pfam Ion transport protein 100 418 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car02g00648 711 ProSiteProfiles cAMP/cGMP binding motif profile. 491 588 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00648 Car20g00437 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00648 Car-Chr2:4882037 Car02g00892 Car-Chr2:6324982 0 dispersed
Car03g01110 Car-Chr3:8957918 Car02g00648 Car-Chr2:4882037 6.36E-124 dispersed
Car16g00821 Car-Chr16:5402498 Car02g00648 Car-Chr2:4882037 3.77E-127 transposed
Car02g00648 Car-Chr2:4882037 Car20g00437 Car-Chr20:2459197 9.91E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00648 K05391 - csv:101210775 1296.95