Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00682 ATGGATACTGCTCAATGGCCTCAGGAGATTGTGTTGAAACCCAATGAAGAAATTGTGGCAAACACTTGCCCAAAACCAAGTGGTGTATCTGTTGTTGAGAGGAAAATTAGACCACAAAAGGAACAAGCTTTGAATTGTCCGAGGTGCAATTCCAGCAATACTAAGTTTTGTTATTACAATAATTATAGCCTCACACAACCAAGATACTTTTGCAAAACATGTCGAAGGTATTGGACTGAAGGTGGTTCCTTGAGAAACATTCCTGTCGGAGGTGGCTCAAGGAAGAACAAAAGGCCTTCTTCTTCTTCTACTACTACTTCTTCTAATTCTTCTTCTTCTACTTTATCCACATCTCCCACTTGTTCTAATCTTCCTCCAAAGAACCCTCTTCATCTCCCTCAAACCCCTAAAACCACTCCTTCCCAAGATCTCAATTTGTCCTTTCCGTCGTCCAATCAGCTTTCGGCCATGGAGCTTCTCACCGGGATGGCGACCAACTCTAAGGGTTTAAATTGTTTCATTCCAATGCCTTCTATTGTCCCTGATCCTGCCTCCGTTTACGCATCGGGGTTTCCTGATCTCCATGATCAATTCAAGCCGAGCCTCGGATTCTCTCTCGATGGATATGGCGTTGTCCCGGGCGAGGCTAGCAATGGCGGGGGAGGGAGGGTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGGCTAATGGAGTTGAGGAAGGGAAAGAGCATGGAGATTCAAGTGGGTATTGGAGTGGGATGTTGGGTGGAGGATCATGGTAA 786 45.67 MDTAQWPQEIVLKPNEEIVANTCPKPSGVSVVERKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTTTSSNSSSSTLSTSPTCSNLPPKNPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMATNSKGLNCFIPMPSIVPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSGMLGGGSW 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5080066 5081266 + Carg08541-RA Car02g00682 143168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00682 261 MobiDBLite consensus disorder prediction 238 261 - -
Car02g00682 261 MobiDBLite consensus disorder prediction 85 148 - -
Car02g00682 261 Pfam Dof domain, zinc finger 42 98 IPR003851 GO:0003677|GO:0006355
Car02g00682 261 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Car02g00682 261 MobiDBLite consensus disorder prediction 95 148 - -
Car02g00682 261 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00682 Car15g01176 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00682 Car-Chr2:5080066 Car15g00949 Car-Chr15:6917930 3.23E-52 dispersed
Car15g01176 Car-Chr15:9192432 Car02g00682 Car-Chr2:5080066 5.78E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2998 PF02701 zf-Dof 4.10E-33 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00682 - - cpep:111796026 508.064