Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00684 ATGAGTTGTGGTTCGGATTTCATGTCTGGGAATTCTGAGGCTGATGATCTTAATATTTTAGAGAAGGATCCAACTGGACGATATATACGGTACGATGAGATCTTGGGTAAAGGGGCATTCAAGACATTTGTTAATCAGTTTAGGTTGAATATTGTTGGATCAAGAGAGGGTATATTATTTGACTTGAGATCTGTTTTTATTATCATCAGATTCAAAGCTTTCGATAAAGCTGGTGGAATCGAAGTTGCTTGGAGCCAAGTGGACATTGAAGATGTTTTGCAGTCACCTGAACAGCTTCAAAGATTGTATTCTGAGGTTCATTTGCTGAAGTCACTGAAACATGAGAATATTATCAAGTTCTATAGTTACTGGGTTGATGATAACACTAAGACTATCAACATGATTACAGAATTGTTCACTTCTGGGAGTTTGAGGCAATATCGAAAGAAGCACAGGAAAGTTGACTTGAAGGCTTTCAAGAACTGGGCAAGGAAGATACTGCGGGGTTTAACGTATTTGCACGGTCAGGATCCTCCAATTATTCACAGGGATTTGAAATGTGATAATATATTTGTCAATGGAAATACTGGAGAAGTTAAAATCGGAGATCTCGGATTGGCGATCGTCTTGCAGCAGCCGACTGCCCGAAGTGTAATTGGCACTCCAGAGTTCATGGCTCCAGAGCTCTATGATGAGGACTACAATGAACTTGTTGATATCTATTCTTTTGGCATGTGCATGTTGGAAATTGTTACTTGTGAATACCCATATAATGAGTGCAAAAATTCTGCCCAAATATTCAAGAAGGGTGTAATGCCTGCTTCCCTTGAAAAAGTGTTGGATCCTCAAGTTAGGCAGTTCATAGAGAAGTGTCTGGTTCCAGCATCCATGAGACTACCTGCAAGTGAACTCTTGAAAGATCCATTCCTTGCAACTGAAAATCGCAAGGATCATAGCTCCGAACCTTCAATGTTATTGAATGCGCAGTTCGAATCAGTAAATCCTCCTCTGCTGGATACTAATCCAATGGACATGGATCACAATTGCAGCAAACTCTCAGGCTCAGTGGCCTCATCTATCGAAAGCAATAATGAAATTTCTCACTTTTCGACTCAGGAACTCAAGACGCTCACTGAGAACAATGAATTGACACTGAAAGGGGACATGACTGATCATAATTCGATTTCGTTCCATTTGCGCATTGCCGAATTATCTGGTCAATCTAAGAACATCCATTTTGCGTTCTTTCTCGATTCCGATACTGCGTTGGCTATTGCTTTGGAGATGGTTGAACAACTTGAACTGTCAAATGAAGATGCTACCATCATAGCACAACTGATAGATGAATTAATTGCCAAGTTTGTTCCCAGTTGGCAACAATGTACAAATTTTTGTGACGGACTAATTACTGAACATAGTTCTTCTGAAACCGAAGAGGATAAGGCCTTCAGTCCTCCTCTCTTCTCTGAGATGGTACTGTCTTCTCCCTTGGTGGGCGCCGGTAGGAAAACTCTGACAGAATTAGCGGAGGTGGAACATCAAGAAAACCAGCAGACAATCATCTCATGTGCATCTCTGGACTACAATCACTCAACCATCTCAGATTACAGCCTGGGAAAAGGAGGATCAGAGTGTGGTGACTTCAGCCACCCGGAATGCGACAAAGCTTTTATCAGCAGTGGCAGCGGAACCAGCGATTTAGATGCTGTTGGATCTGTTTCGACTATGTTCGATTTTGCCAAACCGTCCCTAATCTCCTCCTGCTCAGGAATGTCGAAAGAATTGAGCTTGTCTAACTTCTCCAATTTTTCTGTGGAAGAAAGAGACCAGCATGATGAACTGAAGATGGAGATTGATGCTATTGACATGCAGTACCACCAGTGCCTTTGTGAACTGTCGAGAATGAGAGAGGAAGCTATTGAAAGTGCCAAGAAGAGGTGGATGTCAAAGAAGAAAGGTGCTGCTATTTGA 1971 41.81 MSCGSDFMSGNSEADDLNILEKDPTGRYIRYDEILGKGAFKTFVNQFRLNIVGSREGILFDLRSVFIIIRFKAFDKAGGIEVAWSQVDIEDVLQSPEQLQRLYSEVHLLKSLKHENIIKFYSYWVDDNTKTINMITELFTSGSLRQYRKKHRKVDLKAFKNWARKILRGLTYLHGQDPPIIHRDLKCDNIFVNGNTGEVKIGDLGLAIVLQQPTARSVIGTPEFMAPELYDEDYNELVDIYSFGMCMLEIVTCEYPYNECKNSAQIFKKGVMPASLEKVLDPQVRQFIEKCLVPASMRLPASELLKDPFLATENRKDHSSEPSMLLNAQFESVNPPLLDTNPMDMDHNCSKLSGSVASSIESNNEISHFSTQELKTLTENNELTLKGDMTDHNSISFHLRIAELSGQSKNIHFAFFLDSDTALAIALEMVEQLELSNEDATIIAQLIDELIAKFVPSWQQCTNFCDGLITEHSSSETEEDKAFSPPLFSEMVLSSPLVGAGRKTLTELAEVEHQENQQTIISCASLDYNHSTISDYSLGKGGSECGDFSHPECDKAFISSGSGTSDLDAVGSVSTMFDFAKPSLISSCSGMSKELSLSNFSNFSVEERDQHDELKMEIDAIDMQYHQCLCELSRMREEAIESAKKRWMSKKKGAAI 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5090692 5093702 + Carg08539-RA Car02g00684 143170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00684 656 Pfam Protein kinase domain 72 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00684 656 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 397 452 IPR024678 GO:0004674|GO:0005524
Car02g00684 656 ProSiteProfiles Protein kinase domain profile. 29 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00684 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00684 Car15g01179 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00684 Car-Chr2:5090692 Car08g01027 Car-Chr8:7007254 3.73E-143 dispersed
Car14g01923 Car-Chr14:14738010 Car02g00684 Car-Chr2:5090692 0 transposed
Car15g01179 Car-Chr15:9208157 Car02g00684 Car-Chr2:5090692 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88656 PF00069 Pkinase 5.60E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00684 K08867 - csv:101207748 1010.36