Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00707 ATGGATTTTGGGTTCAATTCACTTCAAAATCACCATCTTCGCTCGAGAAATGGCCTGAATTTGGAGCCGGCGGAGGAAGCTAGTTCCGCCGCCGTGGATTTCGACGGTGGTGGTGGTGGTGGAGGTGGTGGAGGAGAGGTTGAGAGGGAACATATGTTTGACAAAGTGGTGACGCCGAGTGATGTTGGGAAATTGAATCGGTTAGTGATTCCAAAGCAACATGCTGAGAGGTTTTTCCCATTAGATTCATCAACAAATGAAAAGGGTTTGCTTTTAAATTTCGAAGATCGTCACGGGAAATCATGGCGGTTTCGTTACTCTTACTGGAATAGTAGCCAGAGTTATGTTATGACTAAAGGTTGGAGTCGATTCGTTAAAGAGAAGCGTCTCGACGCCGGTGATGTCGTATCGTTTCAACGTGGAGTTGGTGAAATTGGAAGAGATCGTCTTTACATTGACTGGCGTCGTCGCCCGGAGCTTCCAATTGACCACCATCACCACCACCCCATCGGCATCCGACCAAGCATCGTCATGCCCACCACCGCTTGGGGGTCATTAGTATGGCAACCACTTGGCGTTACAGCAACTGGATATCATCATCCAGCTACCGTAGCACCGCAGGACCACACACACATGTCGCGAATAAACAACAACAACAACAGCAACAGCAACGTTAACCGTATGTATGATAGGAATAGAGGGTATTGTCCTTACGGATATGGGAGTGTCGAATCATCATCGTCATCAGAAATGGTGTTTTTTGGGAGAGCCTCAAGATTAGGGGATGGTTTGGAGGGGAAGAACGAGATGCAGCCGGAGTATATGAGTAGTGGCGGTGGTGGTGGTGGTTCGATGGCGGTCCAAGAGAGTTACAGCGAAGAAGATACGCCGGTGAAGAGATCAAGGCTGAGGCTTTTTGGTGTAAATATGGAGATGGAGTGCCCAATAATGTCATCTTCTTCAGATGAATGTGACTTATTACTGTCTTCTTCTTCTAATTCAAACCCCAAAACCACCGCTCCTTCCAATTGA 1032 47.58 MDFGFNSLQNHHLRSRNGLNLEPAEEASSAAVDFDGGGGGGGGGGEVEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSTNEKGLLLNFEDRHGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDVVSFQRGVGEIGRDRLYIDWRRRPELPIDHHHHHPIGIRPSIVMPTTAWGSLVWQPLGVTATGYHHPATVAPQDHTHMSRINNNNNSNSNVNRMYDRNRGYCPYGYGSVESSSSSEMVFFGRASRLGDGLEGKNEMQPEYMSSGGGGGGSMAVQESYSEEDTPVKRSRLRLFGVNMEMECPIMSSSSDECDLLLSSSSNSNPKTTAPSN 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5225614 5226645 - Carg08516-RA Car02g00707 143193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00707 343 ProSiteProfiles B3 DNA-binding domain profile. 53 158 IPR003340 GO:0003677
Car02g00707 343 MobiDBLite consensus disorder prediction 323 343 - -
Car02g00707 343 Pfam B3 DNA binding domain 53 157 IPR003340 GO:0003677
Car02g00707 343 MobiDBLite consensus disorder prediction 24 48 - -
Car02g00707 343 MobiDBLite consensus disorder prediction 274 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00707 Car-Chr2:5225614 Car16g00537 Car-Chr16:3397351 1.63E-64 dispersed
Car17g00502 Car-Chr17:4446191 Car02g00707 Car-Chr2:5225614 5.97E-67 transposed
Car15g01205 Car-Chr15:9362991 Car02g00707 Car-Chr2:5225614 4.82E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3000 PF02362 B3 1.40E-29 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00707 - - cpep:111796005 590.882