Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00709 ATGAGTTCCTTTACTTCCTCTGAAGATTGTCTCGGTTGGGCCGCAAGAGATCCGTCTGGATTTCTGTCCCCTTATAAATTCAGTCGTAGGGTTCCTGGAGATGATGATGTTTCAATTACAATAACACATTGCGGAATTTGTTATGCAGACGTATTATGGACAAGAAATAAATTAGGAGATTCAAAATATCCTTTGGTGCCTGGACATGAGATTGCAGGAATTGTGAAAACTGTTGGCGCAAATGTTCACCGATTTAAAGTTGGAGATCATGTTGGGGTAGGAACTTACGTGAATTCTTGCAGACAATGCGAGTATTGTGAAGATGGTCAAGAAGTTTGTTGCACGGGTGGATCCACTAATACTTTTAATGGAATTGATTTTGACGGTACAATTACAAAGGGAGGATATTCTAACTACATAGTTGTCCATGAGAGATACTGCTACAGAATTCCTGAGAATTATCCTTTAGCTTCAGCTGCTCCTCTGCTTTGTGCTGGAATTACAGTTTATTCTCCAATGATTCGTCATAAGATGAATCAACCTGGTAAATCTCTAGGAGTGATTGGTCTTGGTGGTCTCGGCCACTTGGCAGTGAAGTTCGGGAAGGCTTTTGGACTAAATGTGACAGTTTTTAGCACTAGCATATCCAAGAAAGAAGAAGCCCTGAGCGTTCTTGGAGCAGACAAATTTGTTCTCTCATCTGATACCGAGCAAATGGAGGCCTTGTCTAAGTCCCTTGACTTCATTATCGATGCTGCATCTGGTGATCATCCATTTGATCCATACATGTCTACATTGAAGGTTGGTGGCACTATGGTTCTGGTTGGGTTTCCTTCTCAAGTCAAATTCAGTCCTGCAAGCCTAAATTTGGGTATGAGAACTATTTCTGGGAGCGTAACTGGAGGCACTCGAGTGACCCAAGAAATGATCGACTTCTGTGCTGCTCATGGAATCTATCCAAACATTGACGTGATTCCAATTCAATATTCTAATGAAGCCATTGAAAGGGTAATAAAAAACGATGTCAAGTACCGATTTGTAATTGATATTCAAGGCTCCCTAAAATGA 1068 41.1 MSSFTSSEDCLGWAARDPSGFLSPYKFSRRVPGDDDVSITITHCGICYADVLWTRNKLGDSKYPLVPGHEIAGIVKTVGANVHRFKVGDHVGVGTYVNSCRQCEYCEDGQEVCCTGGSTNTFNGIDFDGTITKGGYSNYIVVHERYCYRIPENYPLASAAPLLCAGITVYSPMIRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKEEALSVLGADKFVLSSDTEQMEALSKSLDFIIDAASGDHPFDPYMSTLKVGGTMVLVGFPSQVKFSPASLNLGMRTISGSVTGGTRVTQEMIDFCAAHGIYPNIDVIPIQYSNEAIERVIKNDVKYRFVIDIQGSLK 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5244869 5248838 - Carg08514-RA Car02g00709 143195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00709 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Car02g00709 355 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Car02g00709 355 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Car02g00709 355 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00709 Car-Chr2:5244869 Car03g00777 Car-Chr3:6486582 3.52E-112 dispersed
Car02g00709 Car-Chr2:5244869 Car20g00941 Car-Chr20:10326946 3.39E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00709 K00083 - csv:101211438 650.973