Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car02g00715 | ATGGAACCCGCTGCAGAACCTGGATCCGGATCCGGATCCGGATTGGAATTACCTCCATCTCAATCTCAATTTACTGTTTCGCCGCCGGATATCACCACTCCGTCCTTGACTGTAGACGCCATAACCGATTCTCAACAAGTCGAAGTTGCTTCGCCGATTAGTAGTCGTCCTCCTGCATCGTCTTCCTTGAATTATGAGGAAATCTTTCGTCTCTCCACTACTGTCCAGATGCCGGTCGTCGGCGATGATGAAGCACTTGCCGGAGATGATGCCGACCGAACAACCGGGAGTAGCGGCGCTGGTAATCGATGGCCTCGTCAAGAAACTCTAGCGCTGCTTAGAATTAGGTCAGATATGGATTCCGCTTTCCGTGATGCGACACTCAAAGGTCCTCTCTGGGATGAAGTTTCCAGGAAGCTAACGGAATTGGGTTACAACAGAAGCGCCAAAAAGTGCAAAGAGAAATTCGAGAACGTTCAGAAATATTACAAGCGCACTAAAGAAGGCCGTGGTGGCCGTCAAGATGGCAAAACCTACAAATTCTTCACACAACTTGAGGCACTTCACAACGCCTCCGCCTCCGCCTCCGCCTCCGCCGCGGCATCTACTCCCACCGTGGCGGTTTCTTGTTTCTCAGCGCCGCCCATTGGTTTTGGAATTAGTAACCCAACTCCAATCTCATCTGTCAAAATCTCTTCTACTGTTATTTCCTCACAGACCCCAATGGGAATCTATTCACCTGCTGACCATTTCACCGTCAGGCCACCGCCTGTGACCGCTCCTATGGGTGTCAGCTTTTCGTCGAACACCTCGTCTGCATCGACGGAGGAGGATGATGACGATGAAGAAGAGATGGGGTTTGATGTTGACCTTGAAGGGGAGCCGTCGAGTGTCGCCGGAACCAGTCGGAAGCGGCGGAGGGGGGTGGTTAAGGGAAGTGGGTCGAAAACCCATAAGATGATGATGGAGTTTTTTGAGGGTTTGATGAAGGAAGTGATGCATAAACAGGAGGTTATGCAGCAGAAGTTTCTGGAAGCGATGGGGAAGAGAGAGCAGGATAGAATGATTAGAGAAGAGACGTGGAAAAGGCAAGAAATGGCTAGATTGAGCCGAGAGCAAGAGAGAATGGCACAAGAACGGACAATTTCTGCTTCTAGGGATGCCGCTATCATTGCTTTTCTTCAGAAATTTACTGGCCAAACCATTCAATTACCTGTGGTGAATATCCCTTCTTCTGTAGCCCCACACCACCAACATCAACAACATGATGTGCCTGTGCCTATGCCTGTGCCTATGCCTGTGCCTGTCCCAGTGTCAGTGCCCGTGCCATTATCTCCTGTCCCCCCTCCGCCATTGCAACCACAAACAGCTCTGTCACTGCAGCAAAATAAAAAAACCGCCCAGGATCAGAATCCGCCGCCTTCAAATACACTGTCGCCATTGGATCAGCCAATGCCATATCAGGAAATCAGCCAAGGGGGAGATGGGAGTGCCGAACCCTTCTCTTCAAGATGGCCAAAACCAGAAGTTCTAGCTCTGATTAAGCTGAGAGGTGGGCTTGAAACGAGGTATCAAGAGACAGGTCCAAAGGGTCTTCTCTGGGAAGAAATATCAGCTGGAATGCAACGGATGGGTTACAAGAGAAGCGCCAAAAGATGCAAGGAGAAATGGGAAAACATCAATAAGTACTTCAAGAAGGTTAAAGAAAGCAACAAAAAACGCCGCGAGGATTCCAAAACCTGCCCCTATTTCAACGAACTCGACGCCCTTTACCGCAAAAAGATCCTCGGCAGCAGCGGCGGCGGCGGCGGCGGTGGTTCTGATGGCGGTGGTAGTGGCAGTAGAAGCTCGTTCAGCGACACGAGCAAAACCGAACAAGACCCCATTAAGAATATGGACACGAAAATGGCCCCATCAACAGCTACAGAAACTTCTCAAACCATACTCACTGAAGGCCTCTCCGCAAGCCTCTTCGGTGAAGGAACTGAAGAACAACCAGCAACATCCACGAAGCCAGAAGACATTGTGAATGAGCTGATGGAGCTGCATGAGCTCTACCGACCTGATAGCAACAATGAAGAAGAGTATTGCAGCGAAGATGAGGATGATACACCAGACAACGACGACAAGGACAAGAACAAGAACACGAAGAACACGAAGAACATGGATTACAAAATAGAGTTTGAGAGAAGAAATGCAGGGAGCTCCAATGGCGTGGGGAATGAGTTTCAGTCAATGGCGGTGGTTCAATAG | 2253 | 49.84 | MEPAAEPGSGSGSGLELPPSQSQFTVSPPDITTPSLTVDAITDSQQVEVASPISSRPPASSSLNYEEIFRLSTTVQMPVVGDDEALAGDDADRTTGSSGAGNRWPRQETLALLRIRSDMDSAFRDATLKGPLWDEVSRKLTELGYNRSAKKCKEKFENVQKYYKRTKEGRGGRQDGKTYKFFTQLEALHNASASASASAAASTPTVAVSCFSAPPIGFGISNPTPISSVKISSTVISSQTPMGIYSPADHFTVRPPPVTAPMGVSFSSNTSSASTEEDDDDEEEMGFDVDLEGEPSSVAGTSRKRRRGVVKGSGSKTHKMMMEFFEGLMKEVMHKQEVMQQKFLEAMGKREQDRMIREETWKRQEMARLSREQERMAQERTISASRDAAIIAFLQKFTGQTIQLPVVNIPSSVAPHHQHQQHDVPVPMPVPMPVPVPVSVPVPLSPVPPPPLQPQTALSLQQNKKTAQDQNPPPSNTLSPLDQPMPYQEISQGGDGSAEPFSSRWPKPEVLALIKLRGGLETRYQETGPKGLLWEEISAGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFNELDALYRKKILGSSGGGGGGGSDGGGSGSRSSFSDTSKTEQDPIKNMDTKMAPSTATETSQTILTEGLSASLFGEGTEEQPATSTKPEDIVNELMELHELYRPDSNNEEEYCSEDEDDTPDNDDKDKNKNTKNTKNMDYKIEFERRNAGSSNGVGNEFQSMAVVQ | 750 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 5313359 | 5316414 | - | Carg08508-RA | Car02g00715 | 143201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car02g00715 | 750 | ProSiteProfiles | Myb-like domain profile. | 102 | 160 | IPR001005 | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 14 | 36 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 262 | 315 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 456 | 486 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 599 | 750 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 610 | 625 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 707 | 730 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 274 | 290 | - | - | |
| Car02g00715 | 750 | Pfam | Myb/SANT-like DNA-binding domain | 102 | 188 | IPR044822 | - | |
| Car02g00715 | 750 | Pfam | Myb/SANT-like DNA-binding domain | 503 | 590 | IPR044822 | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 734 | 750 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 676 | 693 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 633 | 653 | - | - | |
| Car02g00715 | 750 | MobiDBLite | consensus disorder prediction | 445 | 504 | - | - | |
| Car02g00715 | 750 | ProSiteProfiles | Myb-like domain profile. | 503 | 561 | IPR001005 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car02g00715 | Car15g01214 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g00715 | Car-Chr2:5313359 | Car14g00256 | Car-Chr14:1196989 | 7.10E-18 | dispersed | |
| Car04g02934 | Car-Chr4:22033216 | Car02g00715 | Car-Chr2:5313359 | 2.75E-07 | dispersed | |
| Car12g00816 | Car-Chr12:7829033 | Car02g00715 | Car-Chr2:5313359 | 1.67E-06 | dispersed | |
| Car15g01214 | Car-Chr15:9473753 | Car02g00715 | Car-Chr2:5313359 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 3001 | PF13837 | Myb_DNA-bind_4 | 4.60E-22 | CL0123 | Car | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car02g00715 | - | - | cpep:111795959 | 1226.85 |