Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00717 ATGCCGGAATCGGAAAGTGGAACGCCGGTGCCGTCGGCTCCGGCCACGCCGGGGACGCCGGGAGGGCCGCTGTTTTCTGGCTTGCGGGTGGATTCGTTGTCGTACGATCGGAAGTCAATGCCGCGGTGTAAGTGCTTGCCCGTGAATGCTCCCACGTGGGGCCAGCCTCACACGTGCTTCACTGACTTTCCTGTTCCTGATGTTTCTCTCACCCGCAAGTTGGGAGCAGAATTCGTGGGAACATTCATCCTGATATTTGCGGCGACGGCAGGACCCATTGTGAATCAGAAGTACAACGGCGCTGAGACTCTGATCGGAAACGCTGCGTGTGCCGGGCTGGCCGTAATGATCGTAATTCTGTCGACTGGACACATCTCCGGCGCCCACCTAAACCCATCGCTCACCATTGCCTTCGCCGCTCTCCGCCACTTCCCATGGGTCCAAGTCCCTGCCTACATCGCTGCTCAGGTCTCTGCTTCCATTTGCGCCTCTTTTGCTCTTAAAGGTGTTTTTCACCCTTTCATGTCTGGCGGCGTCACCGTCCCCTCTGTCAGCACCGGCCAAGCCTTCGCTCTTGAATTCTTTATCACTTTCAATCTCTTGTTCGTTGTCACCGCCGTCGCAACCGATACTCGAGCGGTGGGAGAGTTGGCTGGGATTGCAGTTGGAGCTACAGTTATGGTGAACATTCTTGTGGCCGGGCCCTCAAGTGGTGGTTCCATGAACCCTGTTCGAACATTGGGCCCCGCCGTGGCTGCCGGAAATTACAGAGCATTATGGGTGTATCTAGTGGCACCAACGCTGGGAGCCATCGTCGGCGCGGGAACTTACACCGCCGTGAAGCTGCGAGACGACGAAGTGGATGCTCCGTCTCAGGTGAGGAGCTTCCGCCGCTGA 897 57.75 MPESESGTPVPSAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGQPHTCFTDFPVPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFFITFNLLFVVTAVATDTRAVGELAGIAVGATVMVNILVAGPSSGGSMNPVRTLGPAVAAGNYRALWVYLVAPTLGAIVGAGTYTAVKLRDDEVDAPSQVRSFRR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5325534 5328682 - Carg08506-RA Car02g00717 143203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00717 298 MobiDBLite consensus disorder prediction 1 24 - -
Car02g00717 298 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00717 298 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00717 298 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00717 298 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00717 298 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00717 298 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00717 298 SUPERFAMILY Aquaporin-like 69 286 IPR023271 -
Car02g00717 298 Pfam Major intrinsic protein 68 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00717 298 Gene3D Glycerol uptake facilitator protein. 64 292 IPR023271 -
Car02g00717 298 PANTHER AQUAPORIN NIP2-1 11 296 IPR034294 -
Car02g00717 298 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Car02g00717 298 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 11 296 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00717 Car15g01216 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00717 Car-Chr2:5325534 Car03g01208 Car-Chr3:9461180 1.60E-71 dispersed
Car01g00157 Car-Chr1:793675 Car02g00717 Car-Chr2:5325534 8.29E-125 transposed
Car04g00580 Car-Chr4:3309905 Car02g00717 Car-Chr2:5325534 3.17E-104 transposed
Car15g01216 Car-Chr15:9490964 Car02g00717 Car-Chr2:5325534 4.45E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00717 K09874 - csv:101212651 566.614