Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g00752 | ATGGAGGAGAAAGAGGGTGTTGATTTCGGATTTGCATTAAAAGTGAGCCAAGCTCCAGATAGCTTCGGGATGATGGAATCGAGACCTGAAAATACAAGCACGGACAGCGAGCCACCTCCTCCGCCTCCGCCTCCGCCGCCGACGACGGCGACGGTGGAAGCAGCTCAGACGCTGGCGGGTACAGATGGAAAGAAGAAAAGAGGGAGGCCGAGAAAGTACGGACCCGATGGGACTGTAGTGCCAACATTGTCGCCAATGCCGATTTCATCATCGATTCCGTTGACGGGAGAGTTTCCGGGATGGAAACGGGGAAGGGGGAGGTCAGTAGAATCGCTCAAGAAGTCGCGGAAGTACGATTATGAGATTCCAGGAGACAAGGTTGCCTTCTTTGCGGGAGCAGATTTCACACCTCACGTGATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAGTAATGTCATTTTCTCAACAAGGATCTCGGGCCATTTGTATACTCTCTGCTAATGGTATGGTTTCAAATGTCACACTTCGGCAGTCAACATCTTCTGGGGGTACCCTAACATATGAGGGTCGATTTGAGATACTTTCGTTATCTGGATCATATATGCCTTCTAAGATTGGTGGAACAAAGAGCCGATCCGGAGGGATGAGTGTCTCTTTGGCTTGCCCAGATGGCCGAGTAATGGGTGGAGGACTTTCCGGCATGCTAATAGCAGCTGGTCCAGTGCAGGTGGTTGTGGGCAGTTTCCAACCACCAGGCCACCAACAGGAGAATAAACCAAAGAAGAGCAGGATGGAACCGACATCAAATGCAATTTCACCTCCTCCCGCTATTAAGCCCATAGGAGATAAAACAGATTCTTTAGACCCAAATCCAGCTTTTAGAACTGCACCAGTCAACGAAAAACCACCTTCTCCAGAAGAATCAAGACTTGTCCTCAACCATCCAAACCATGAGCGGTATGAGCTCATTGATTCTGTGAAGGGCTAA | 993 | 49.14 | MEEKEGVDFGFALKVSQAPDSFGMMESRPENTSTDSEPPPPPPPPPPTTATVEAAQTLAGTDGKKKRGRPRKYGPDGTVVPTLSPMPISSSIPLTGEFPGWKRGRGRSVESLKKSRKYDYEIPGDKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSKIGGTKSRSGGMSVSLACPDGRVMGGGLSGMLIAAGPVQVVVGSFQPPGHQQENKPKKSRMEPTSNAISPPPAIKPIGDKTDSLDPNPAFRTAPVNEKPPSPEESRLVLNHPNHERYELIDSVKG | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5508278 | 5514410 | + | Carg08470-RA | Car02g00752 | 143238 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g00752 | 330 | MobiDBLite | consensus disorder prediction | 1 | 88 | - | - | |
Car02g00752 | 330 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 137 | 251 | IPR005175 | - | |
Car02g00752 | 330 | MobiDBLite | consensus disorder prediction | 34 | 50 | - | - | |
Car02g00752 | 330 | MobiDBLite | consensus disorder prediction | 248 | 330 | - | - | |
Car02g00752 | 330 | MobiDBLite | consensus disorder prediction | 313 | 330 | - | - | |
Car02g00752 | 330 | ProSiteProfiles | PPC domain profile profile. | 132 | 271 | IPR005175 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car02g00752 | Car18g01102 | CCT | |
Car02g00752 | Car18g01102 | ECH | |
Car02g00752 | Car15g01102 | CST | |
Car02g00752 | Car15g01247 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00752 | Car-Chr2:5508278 | Car06g00971 | Car-Chr6:7448183 | 5.07E-79 | dispersed | |
Car17g00389 | Car-Chr17:2588607 | Car02g00752 | Car-Chr2:5508278 | 9.16E-66 | dispersed | |
Car14g01784 | Car-Chr14:13966301 | Car02g00752 | Car-Chr2:5508278 | 5.09E-90 | wgd | |
Car15g01247 | Car-Chr15:9673141 | Car02g00752 | Car-Chr2:5508278 | 4.15E-128 | wgd | |
Car18g01102 | Car-Chr18:11045895 | Car02g00752 | Car-Chr2:5508278 | 2.71E-101 | wgd | |
Car02g00752 | Car-Chr2:5508278 | Car02g01272 | Car-Chr2:8526097 | 1.42E-78 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g00752 | - | - | csv:101211908 | 478.018 |