Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00752 ATGGAGGAGAAAGAGGGTGTTGATTTCGGATTTGCATTAAAAGTGAGCCAAGCTCCAGATAGCTTCGGGATGATGGAATCGAGACCTGAAAATACAAGCACGGACAGCGAGCCACCTCCTCCGCCTCCGCCTCCGCCGCCGACGACGGCGACGGTGGAAGCAGCTCAGACGCTGGCGGGTACAGATGGAAAGAAGAAAAGAGGGAGGCCGAGAAAGTACGGACCCGATGGGACTGTAGTGCCAACATTGTCGCCAATGCCGATTTCATCATCGATTCCGTTGACGGGAGAGTTTCCGGGATGGAAACGGGGAAGGGGGAGGTCAGTAGAATCGCTCAAGAAGTCGCGGAAGTACGATTATGAGATTCCAGGAGACAAGGTTGCCTTCTTTGCGGGAGCAGATTTCACACCTCACGTGATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAGTAATGTCATTTTCTCAACAAGGATCTCGGGCCATTTGTATACTCTCTGCTAATGGTATGGTTTCAAATGTCACACTTCGGCAGTCAACATCTTCTGGGGGTACCCTAACATATGAGGGTCGATTTGAGATACTTTCGTTATCTGGATCATATATGCCTTCTAAGATTGGTGGAACAAAGAGCCGATCCGGAGGGATGAGTGTCTCTTTGGCTTGCCCAGATGGCCGAGTAATGGGTGGAGGACTTTCCGGCATGCTAATAGCAGCTGGTCCAGTGCAGGTGGTTGTGGGCAGTTTCCAACCACCAGGCCACCAACAGGAGAATAAACCAAAGAAGAGCAGGATGGAACCGACATCAAATGCAATTTCACCTCCTCCCGCTATTAAGCCCATAGGAGATAAAACAGATTCTTTAGACCCAAATCCAGCTTTTAGAACTGCACCAGTCAACGAAAAACCACCTTCTCCAGAAGAATCAAGACTTGTCCTCAACCATCCAAACCATGAGCGGTATGAGCTCATTGATTCTGTGAAGGGCTAA 993 49.14 MEEKEGVDFGFALKVSQAPDSFGMMESRPENTSTDSEPPPPPPPPPPTTATVEAAQTLAGTDGKKKRGRPRKYGPDGTVVPTLSPMPISSSIPLTGEFPGWKRGRGRSVESLKKSRKYDYEIPGDKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSKIGGTKSRSGGMSVSLACPDGRVMGGGLSGMLIAAGPVQVVVGSFQPPGHQQENKPKKSRMEPTSNAISPPPAIKPIGDKTDSLDPNPAFRTAPVNEKPPSPEESRLVLNHPNHERYELIDSVKG 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5508278 5514410 + Carg08470-RA Car02g00752 143238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00752 330 MobiDBLite consensus disorder prediction 1 88 - -
Car02g00752 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 251 IPR005175 -
Car02g00752 330 MobiDBLite consensus disorder prediction 34 50 - -
Car02g00752 330 MobiDBLite consensus disorder prediction 248 330 - -
Car02g00752 330 MobiDBLite consensus disorder prediction 313 330 - -
Car02g00752 330 ProSiteProfiles PPC domain profile profile. 132 271 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00752 Car18g01102 CCT
Car02g00752 Car18g01102 ECH
Car02g00752 Car15g01102 CST
Car02g00752 Car15g01247 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00752 Car-Chr2:5508278 Car06g00971 Car-Chr6:7448183 5.07E-79 dispersed
Car17g00389 Car-Chr17:2588607 Car02g00752 Car-Chr2:5508278 9.16E-66 dispersed
Car14g01784 Car-Chr14:13966301 Car02g00752 Car-Chr2:5508278 5.09E-90 wgd
Car15g01247 Car-Chr15:9673141 Car02g00752 Car-Chr2:5508278 4.15E-128 wgd
Car18g01102 Car-Chr18:11045895 Car02g00752 Car-Chr2:5508278 2.71E-101 wgd
Car02g00752 Car-Chr2:5508278 Car02g01272 Car-Chr2:8526097 1.42E-78 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00752 - - csv:101211908 478.018