Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00788 ATGTATATAACTGGAACTCCTCCATCTCCTTTTCTTCTTCCTCTCTCACTTTTGGATTTCCGTTCTTCGAATTCTCAGCGAAGCGGAGGCTTTAGCTTCCATTGCTCGTCTGGTTTCAGCCTCTTTTCCGCTTTTCAAGAAATACTTGTAGCAGTGATCAGTGAAAGACTGGCTCTAGAGGGCTACTTGGACGCTGTCCAACAAGGACTGGTGACCCCAATGACATCTTCTAGGGTGGCTGGAGGATTAGCCCAATCTTCTTCAAACTCTGGGATCTTTTTCCAAGGAGATGGGCAGTCAAAGGGCAATGTTAAATCTCACTTGGTCTCATCTTATGGAAACTCATCAAATTCAATTCCAGGACCTGGCCACTCAAATTTGGGTCCAGTTTCTGGGGACACGAATAATGTAGTGTTAAATAGTGTGGCAAACTCAGGAATAAGTGTTGGGGCAAGTTCGTTGGTTACAGATGCAAACTCTGCACTCTCAGGTAGGCCTCATTTGCAGAGAAGTCCAAGCATGAATGCAGAATCATACATGCGATTACCTACATCGCCTATGTCTTTTACATCAAATAACGTGAGTCTCTCGGGTGCATCACTCATTGATGCTTCTTCTACAGTACAGCACAATTCTCAGCAGGATCATAACGCCCCACAATTGTTGCAGACCCAACCACAGTCCCAACAAGTTGCTCCAGGTGATGCATCATTGTCAAATTCACAAACCGTCCAAGCTTCTCTACCCGTGGGTGCACGTGTTGCCGGATCTCTCATGACAGATCCCAACAGTTATTCTCAGTCACAGAAGAAACCACGCTTGGATATTAAGCAGGATGATTTCCTGCAACAGCAAATGCTACAACAGCTCCTGCAGAGACAAGATTCCATGCAGCTGCAAGGTCGTAATACGCCGCAGTTACAAGCAGCATTATTTCAGCAGCAACAGAGATTACAGCAACAGCAACAGATTTTTCAGTCTTTGCCTCCTTTGCAGAGAGCTCACCTGCAGCAGCAGCAGCAGATACAGTTGAGACAGCAGCTTCAACAACAGGCAATACAACCCATAAATGCTATGAAGCGGACTAATGATGGTGGTGTATGTGCTCGGCGGCTAATGCAGTATCTATACCATCAGCGTCAAAGACCTGCTGATAATAGTATTGCCTATTGGAGGAAGTTCGTGACAGAATATTATTCCCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTATATGACAATGTTGGTCATCATGCACTAGGCGTTTTCCCTCAAGCAGCTATGGATGCATGGCAGTGTGAAATTTGTGGTTCAAAGTCTGGGCGGGGATTTGAGGCTTCCTTTGAAGTGCTTCCTAGACTCAATGAGATCAAATTTGGCAGTGGAGTCATTGATGAGCTATTGTTCTTGGATATGCCACGGGAGTTCAGATATTCGTCTGGAATTATGATGTTAGAATATGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAACTTCGTGTTATTCGCGAGGGTCACCTTCGTATCATATTTACTCATGAATTGAAGATATTGGCATGGGAATTTTGTGCAAGACGTCATGAAGAACTTCTACCTCGTAGGTTGGTTGCACCTCAGGTGAATCAGTTGGTCCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGATCCGATGGGGCTTCTCAGCAGGATTTACAAGCAAACAGTAATATGGTTTTGACAGCTGGGCAGCAGCTCGCTAAGAGTCTGGAGTTGCAGTCACTTAATGATTTGGGGTTCTCCAAAAGATACGTTAGATGCTTGCAGTTTTACAAAGGATTGTCTGTTCTGTACTTATCTGCTTTGCTCAACATGTTTGGCCCGATCATATCAGAGGTCGTCAACAGCATGAAAGATCTGATTGATTTCTGTAGGGTGCAGAAAACCGGACCAGTTGAGGGTCTGAAAAGTTATCCTCAGCACGCCACGGCCAAGCTGCGGATGCAAAAAAGGCAAGAGATTCAACAGGTCGCTACTGCTCAAGGTCTGCCAACCGACCGCAATAGGATGGTCGCCCTGCATCCTGGGCTGATGAACAACCAAATGAATAGCCAAAATCAAGTAATCGGCAGAGGAGCTTTGAGCAGTTCGGCCCAAGCCGCTTTGGCATTGTCTAACTACCAGAATCTGCTTATGAGACAGAATTCAATGAATTCAAACAGTTCAAACCCGCTTCAGCAGGGGACATCATCATCCTTCAATAACCCAAACCAGAACCAGAGTCCTTCATCAAGCTCTCATGGTGGGACAACTGCTTTGACATCAGGACCGATGCGAAACGTGCTCGGCAGTGCTCTTTCAAGTCCTCATTTACCTTCACAACAATCCAACAACTTAGTTGCGCAAAACCATCCTCAGAGCGCTCAAGGTAGCGGCAACAATAATCAGGCCATGCAACATCAGATGATCCAGCAGCTTCTCCAGATATCTAATAACAACAGTGGGGGAGGGCAACAGCAGCCACTTGCAGGTTCGAACACGAACACGAACGGAAAGATGGGGGGGTCTTATTCAGGGTTCGGCGGCAGTTCTTCAGCAGCTTCTGGCACAGCCAATGCATCCATCAGTAATAATACGCCGCCTGCCCCGAGCCGGAGTAACAGCTTCAAAAGCGCTTCAAATGGGGATGTATCAGCAACTGGAGGTCATAGCAGTGGGTTCAACCAAAAAAGTGGAGACTTGCCGCAAAATCTTCATTTAGAAGAGGACATAATCCAGGATATAGCCCATGATTTTACAGAAAATGGGTTTTTTAACAGTGATCTTGACGATAATATGTGCTTCGCCTGGAAAGTTCAACTAACTTAA 2853 45.85 MYITGTPPSPFLLPLSLLDFRSSNSQRSGGFSFHCSSGFSLFSAFQEILVAVISERLALEGYLDAVQQGLVTPMTSSRVAGGLAQSSSNSGIFFQGDGQSKGNVKSHLVSSYGNSSNSIPGPGHSNLGPVSGDTNNVVLNSVANSGISVGASSLVTDANSALSGRPHLQRSPSMNAESYMRLPTSPMSFTSNNVSLSGASLIDASSTVQHNSQQDHNAPQLLQTQPQSQQVAPGDASLSNSQTVQASLPVGARVAGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQMLQQLLQRQDSMQLQGRNTPQLQAALFQQQQRLQQQQQIFQSLPPLQRAHLQQQQQIQLRQQLQQQAIQPINAMKRTNDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCEICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMMLEYGKAVQESVYEQLRVIREGHLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQFYKGLSVLYLSALLNMFGPIISEVVNSMKDLIDFCRVQKTGPVEGLKSYPQHATAKLRMQKRQEIQQVATAQGLPTDRNRMVALHPGLMNNQMNSQNQVIGRGALSSSAQAALALSNYQNLLMRQNSMNSNSSNPLQQGTSSSFNNPNQNQSPSSSSHGGTTALTSGPMRNVLGSALSSPHLPSQQSNNLVAQNHPQSAQGSGNNNQAMQHQMIQQLLQISNNNSGGGQQQPLAGSNTNTNGKMGGSYSGFGGSSSAASGTANASISNNTPPAPSRSNSFKSASNGDVSATGGHSSGFNQKSGDLPQNLHLEEDIIQDIAHDFTENGFFNSDLDDNMCFAWKVQLT 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5733095 5738453 - Carg08433-RA Car02g00788 143274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00788 950 MobiDBLite consensus disorder prediction 104 132 - -
Car02g00788 950 Pfam LIM-domain binding protein 371 607 IPR029005 -
Car02g00788 950 MobiDBLite consensus disorder prediction 826 909 - -
Car02g00788 950 PANTHER LIM DOMAIN-BINDING PROTEIN 252 946 IPR029005 -
Car02g00788 950 MobiDBLite consensus disorder prediction 730 810 - -
Car02g00788 950 MobiDBLite consensus disorder prediction 223 242 - -
Car02g00788 950 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 78 227 - -
Car02g00788 950 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 252 946 - -
Car02g00788 950 PANTHER LIM DOMAIN-BINDING PROTEIN 78 227 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00788 Car-Chr2:5733095 Car16g00126 Car-Chr16:731820 0 dispersed
Car15g01273 Car-Chr15:9945714 Car02g00788 Car-Chr2:5733095 0 wgd
Car18g01131 Car-Chr18:11251224 Car02g00788 Car-Chr2:5733095 6.04E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00788 - - bhj:120092747 1231.08