Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00793 ATGTCAATCAAAGCCTCGTTTAGCAATGTAGCTAATGTGTTGCTCGATTGGGATGATGATCATAACAACGATTTCTGTTCATGGCGTGGGGTTTTCTGCGACAATCTTAGTCTTTCAGTTGCTGCTCTGAACTTGTCCAACTTGAATCTGGGTGGGGAGATTTCACCAGCCATCGGAGATTTAAGAAACTTACAGTCAATTGATTTTCAAGGAAACAAACTGACGGGACAAATCCCTGATGAGATTGGTAACTGTGGTCTTCTTGTTCATTTGGATTTATCTGATAATTTGCTCTATGGGGACGTCCCCTTCACTGTTTCCAAGCTGAAGCTGCTTGAGTTCTTAAATCTGAAGAACAATCAGTTGACTGGCCCAATCCCTTCTACTCTTACTCAGATTCCTAATCTGAAAACTCTTGATCTTGCACGAAACCTGCTTACTGGAGAGATTCCTAGGCTAATCTATTGGAATGAAGTACTGCAATATCTTGGGTTACGAGGGAACTTCTTGACGGGGTCGCTGTCGTCCGATATGTGTCAGCTGACTGGCTTGTGGTACTTTGATGTAAGGGGGAACAATTTGACTGGAACTATACCTGATAGCATAGGGAACTGTACAAGTTTTGAAATTCTGGATATATCCTACAACCAGATCTCCGGGGAGATTCCTTACAACATTGGATTTCTTCAAGTAGCCACTTTATCATTACAGGGAAACAGGTTGACTGGTAAGATTCCCAATGTCATTGGATTGATGCAGGCCCTTGCAGTCCTGGATTTGAGTGAGAATGAGCTTGAAGGGCCAATTCCCCCAATATTTGGCAACCTATCCTACACAGGGAAATTATACCTACACGGAAACAAGTTGACCGGACCGATACCCCCCGAGCTCGGCAATATGTCAAAGCTTAGCTACCTGCAACTAAATGATAATCAACTAACAGGAACAATTCCATTTGAACTTGGAAAATTGGATCAATTGTTTGAATTGAATCTAGCTAACAATTACCTTGAAGGACCCATTCCTCACAACATCAGTTCTTGCACTGCACTGAATCAATTTAATGTACATGGAAACCGTCTCAACGGATCGATCCCTCTCGGCTTCCAGGAACTGGAGAGCTTAACCTATTTGAATCTCTCAGCTAATAACTTCAAAGGCAGGATTCCAGTTGAGCTGGGACGCATAGTTAACCTTGATACATTGGATCTATCTCGAAACTACTTCTCGGGTCCAGTTCCTGCGTCTGTTGGTGATTTGGAACACCTTCTTATCCTAAATTTGAGTGCCAATCGACTCGTTGGGCCATTACCAGCAGAGTTTGGGAATCTTCGAAGTGTTCAAACTATTGATATGTCATTCAACAACTTCTCTGGTAGCATTCCCATGGAGTTGGGTCAGCTGCAAAACATTGTCTCCCTAATTTTGAACAACAATCATTTGCAAGGGAAGATACCTGATCAGCTGACAAATTGTTTTAGTCTTACCAATTTGAACTTGTCATACAATAATCTATCTGGTATCTTACCTCCCATGAAGAACTTCTCTCGATTCCAGCCTGATAGCTTTATTGGGAATCCTCTGCTGTGTGGAAACTGGCTGGGATTGATCTGTGGACCTTATATGGGAAAACCTCCAGTAATGTTGTCTCGGACAGCGGTTGTTTGTATGACGTTTGGATTCGTTATATTGTTGTCGGTAGTTATAATTGCCGTGTGTAAGTCGAATCCGTCGAAGCAATTGATGAAAGGTTCTAGCAAGACCGGGCAAGGTCCTCCAATTGTGGTACTTCATATGGATATGGCTATTCACACGTTCGACGACATTATGAGAACGACCGAGAATCTAAGCGAGAAATACATTATTGGCTATGGAGCTTCGAGCACTGTGTACAAATGTTCACTGAAGAATTCCCGACCTATTGCAATTAAGCGACTTTACAATCACTACGCTCACAATTTACGGGAGTTTGAGACCGAACTTGAAACCATTGGTAGTATCAGACATAGAAATCTTGTTGTACTTCATGGTTATTCATTATCTCCCTGTGGGAATCTCCTTTTCTATGACTACATGGAAAATGGTTCACTTTGGGATCTGCTTCATGGGCCAGGTAAGAAGGTTAAACTGGATTGGGAAGCACGGTTGAAGATAGCGGTCGGAGCTGCACAAGGGCTTGCATATCTTCACCACGACTGCAACCCGCGAATCATTCACCGGGACGTCAAGTCTTCGAATATTCTACTGGATGAAAACTTTGAGGCTCATCTTTCTGATTTTGGGATTGCCAAATGTATCCCAACTGCCAAAACACATGCCTCGACGTATGTGCTTGGAACAATTGGCTATATTGATCCAGAGTATGCTCGGACCTCTCGGCTAAACGAGAAATCCGATGTTTATAGCTTTGGCATTGTTCTTCTGGAACTACTGACTGGAAAGAAAGCTGTGGATAATGAGTCAAATTTGCATCAACTGATATTGTCAAAGACTGATAACAATACTGTGATGGAAACTGTTGATCCTGAAGTTTCAGTCACATGTATGGATTCAGCTCATGTCCGGAAAATGTTCCAGCTTGCTCTCCTCTGCACAAAACACAATCAAGCGGAACGACCAACAATGCACGAAGTTGCACGAGTTTTGATCTCCCTCCAGCAACCACCTGCATTGAAGCAAACTCCATTCCCTACCAAAACATTGGATTACGCACAATTCGTGATCGACAAGGATCAGAATCAAAATGCAAAAGGACAGGAAGAGGAGCAGCAGAAATCCGACGTGGATTCATCGGATGCTCGGTGGTTTGTTCGGTTTGGGGAAGTTATATCAGAACAACACAGTTTGAATCAGTAG 2856 42.89 MSIKASFSNVANVLLDWDDDHNNDFCSWRGVFCDNLSLSVAALNLSNLNLGGEISPAIGDLRNLQSIDFQGNKLTGQIPDEIGNCGLLVHLDLSDNLLYGDVPFTVSKLKLLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNLLTGEIPRLIYWNEVLQYLGLRGNFLTGSLSSDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPNVIGLMQALAVLDLSENELEGPIPPIFGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNDNQLTGTIPFELGKLDQLFELNLANNYLEGPIPHNISSCTALNQFNVHGNRLNGSIPLGFQELESLTYLNLSANNFKGRIPVELGRIVNLDTLDLSRNYFSGPVPASVGDLEHLLILNLSANRLVGPLPAEFGNLRSVQTIDMSFNNFSGSIPMELGQLQNIVSLILNNNHLQGKIPDQLTNCFSLTNLNLSYNNLSGILPPMKNFSRFQPDSFIGNPLLCGNWLGLICGPYMGKPPVMLSRTAVVCMTFGFVILLSVVIIAVCKSNPSKQLMKGSSKTGQGPPIVVLHMDMAIHTFDDIMRTTENLSEKYIIGYGASSTVYKCSLKNSRPIAIKRLYNHYAHNLREFETELETIGSIRHRNLVVLHGYSLSPCGNLLFYDYMENGSLWDLLHGPGKKVKLDWEARLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILLDENFEAHLSDFGIAKCIPTAKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILSKTDNNTVMETVDPEVSVTCMDSAHVRKMFQLALLCTKHNQAERPTMHEVARVLISLQQPPALKQTPFPTKTLDYAQFVIDKDQNQNAKGQEEEQQKSDVDSSDARWFVRFGEVISEQHSLNQ 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5775093 5780764 - Carg08428-RA Car02g00793 143279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00793 951 MobiDBLite consensus disorder prediction 914 932 - -
Car02g00793 951 MobiDBLite consensus disorder prediction 912 932 - -
Car02g00793 951 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Car02g00793 951 ProSiteProfiles Protein kinase domain profile. 616 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00793 951 Pfam Leucine rich repeat N-terminal domain 2 34 IPR013210 -
Car02g00793 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Car02g00793 951 Pfam Leucine rich repeat 398 457 IPR001611 GO:0005515
Car02g00793 951 Pfam Protein kinase domain 619 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01317 Car-Chr1:11782459 Car02g00793 Car-Chr2:5775093 1.51E-21 dispersed
Car02g00793 Car-Chr2:5775093 Car19g00276 Car-Chr19:3435855 0 dispersed
Car19g00275 Car-Chr19:3435518 Car02g00793 Car-Chr2:5775093 1.21E-34 dispersed
Car02g00793 Car-Chr2:5775093 Car09g00316 Car-Chr9:1754183 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88663 PF00069 Pkinase 1.40E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00793 K20718 - csv:101213139 1719.52