Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00816 ATGCCTCCATGGTGGGGGAAATCATCATCAAAAGAAGCAAAGAAGAGCAAGGAAAGTTTTATCAATGCATTGCAGAGAAAACTTAGAACAGCTGATGGTAAAACAAACAGCAGATCAGGAGGATCTCCAAGAACTTGTAATGATAATGATACAATTTCTGAGCAAGGAACTCGATCTCCTATTCTTTTGAGAACAATTTCACCTTCAAAACAAGTATCAAGATGTCAAAGCTTTTCTTCTGAAAGGCCACAAGCTCAACCTCTACCTCTTCCAGGTGTGCAGCCGCCGATTGTAGGTCGTAATGACTCTGGGATTAGTATTTCGCCAAAACCGAGTTCTGAAAGAAGCTCCAAGCCATCGTCATATCTACCACTCCCAAGACCAGCATGCATACCCAGGAGGCCTAACCATGCTGATTTAGATGCAGAGCTTGGTGTAGGTTCAGTGTCCAGTGAGAGCTCGAATGATAGCGCGGATCTACTAGATTCGCGCCATCGTAGTCCTCAGGCAACTGACTATGATCTCGGGTCTAAAACGGCTGCAGGCAGTCCTTCGAGTGCCATTGTCAAGGATCAGTCTTCTATTGTCACTCCACCAAGTTCACGAGAGCCCAGAAAACCAGCAAATATCTCCTTGAGCAACCACATTTTCTCCACATCACCCAAAAGGAGGCCTTTAAGCAGTCATGTTCCAAATCTGCAAGTCCCATATAATGGGAATTTTTGTATTGCTCCAGACAGTTCAATGTCAAGTCCTTCAAGAAGTCCCATAAGGGCTTTTAGCACAGAGCAAGTTATTAACAATGCTGTTAGTGCTGGAAAGTTCTATATGGATCTCACTTTTCCTGGGTCAGGCCATTGTTCTAGTCCTGGTTCTGGTTACAATTCAGGGCATAACTCAATGGGTGGTGATTTATCAGGACAGCTATTTTTGCAACAAAGCCGAGGTAGCCCGGAGTATTCACCAGCTCCCAGTCCCAGAATGACTAGCCCTGGTCCTAGCTCCAGAGTCCATAGTGGTGCAGTGACACCAATTCATCCTAGAGCAGGAGGGATACCAACCGAGTCACAGACATGGCCTGACGAGAAGCAAACACACCGCCTACCTCTACCTCCGGTCGCAATTTCCAATGCTCCTTTTTCTCATTCCAATTCAGCTGCAACATCTCCCTCTGTTCCAAGAAGTCCTGGAAGAGCTGATAATCCAGCAAGCCCAGGCTCCCGTTGGAAAAAGGGGAAGCTTTTGGGTAGGGGTACCTTTGGTCATGTGTATGTTGGTTTCAACAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACATTATTTTCAGATGATGCAAAGTCCAAGGAGAGTGGCAAGCAATTAATGCAAGAAATCACCTTGTTGAGTCGTTTACGACATCCAAACATTGTGCAGTATTATGGATCTGAAACGGTTGGGGACAGGCTTTACATTTACCTTGAATATGTATCTGGTGGCTCTATTTACAAGCTTCTCCAGGAATATGGACAGCTTGGAGAAGTTGCACTTCGTAGTTATACCCAGCAAATACTGTCCGGGCTTGCGTATTTACATGCTAAGAGTACTGTTCATAGGGATATCAAAGGAGCAAATATACTCGTTGATCCCACGGGGCGTGTTAAGTTGGCTGACTTTGGGATGGCAAAACATATAACTGGGCAATCGTGCCCTTTGTCGCTTAAAGGCAGCCCATACTGGATGGCACCGGAGGTTATAAAGAATTCAAATGGTTGTAATCTTGCTGTGGATATTTGGAGTCTTGGATGCACTGTTTTGGAGATGGCTACAACGAAGCCTCCTTGGAGTCAATATGAGGGAGTCGCTGCAATGTTTAAGATTGGCAATGGCAAAGAACTTCCCGAAATCCCAGATCATCTTCCGCACGATGGAAAAGATTTCGTTAGACAATGTCTGCAACGTAATCCAGCTCATCGTCCTACAGCTGCTCAACTTTTGGAACATCCTTTTGTAAAACATGCTTCACCTCTTGAAAGACCGATTTCGGGTTCTGAGCATTCAGGAAGGAATCCCAGCTTCTTGGATTCTGATAGATCTGCAGCTCCTTCATCTAGACTCTCCACAGCTGTGTTTCATTCCAGTGAAACTCATATACCGAGGAACCTTTCATGTCCTGTTTCCCCCATTGGAAGCCCTCTGGTGCACTCTCGATCGCCACAGCACCCGAGTGGAAGAATGTCTCCGTCGCCCATCTCTAGCCCTCGGAACATGTCAGGTGCATCGACTCCGCTCACGGGAGGAAGCGGTGCTATTCCACACCAGCATCTCAAACAATCACCGTACCTACAGGAGGGTTTTGGGAGCTTGCCGAAGCCTTCAATAGGTCCCTATAGTAATGGTCCTTCATATCAGGATTCGAACCCCGACATCTTTCAAGGGATGGGGATTCAACCAGGTTCTCACATCTTCTCCGAGCAATTTGGAAAGCCTGCTTGGGAATTATACGACGGGCAGGCAGTCTTGGCCGATCGTGTTTCTAGGCAGCTCCTGAGTGATCACATAACAACTCCCTCCCTGGATCTAAATCCGAACTCTCTTTCGACCAACCGCAGATAG 2598 46.5 MPPWWGKSSSKEAKKSKESFINALQRKLRTADGKTNSRSGGSPRTCNDNDTISEQGTRSPILLRTISPSKQVSRCQSFSSERPQAQPLPLPGVQPPIVGRNDSGISISPKPSSERSSKPSSYLPLPRPACIPRRPNHADLDAELGVGSVSSESSNDSADLLDSRHRSPQATDYDLGSKTAAGSPSSAIVKDQSSIVTPPSSREPRKPANISLSNHIFSTSPKRRPLSSHVPNLQVPYNGNFCIAPDSSMSSPSRSPIRAFSTEQVINNAVSAGKFYMDLTFPGSGHCSSPGSGYNSGHNSMGGDLSGQLFLQQSRGSPEYSPAPSPRMTSPGPSSRVHSGAVTPIHPRAGGIPTESQTWPDEKQTHRLPLPPVAISNAPFSHSNSAATSPSVPRSPGRADNPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESGKQLMQEITLLSRLRHPNIVQYYGSETVGDRLYIYLEYVSGGSIYKLLQEYGQLGEVALRSYTQQILSGLAYLHAKSTVHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSLKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNGKELPEIPDHLPHDGKDFVRQCLQRNPAHRPTAAQLLEHPFVKHASPLERPISGSEHSGRNPSFLDSDRSAAPSSRLSTAVFHSSETHIPRNLSCPVSPIGSPLVHSRSPQHPSGRMSPSPISSPRNMSGASTPLTGGSGAIPHQHLKQSPYLQEGFGSLPKPSIGPYSNGPSYQDSNPDIFQGMGIQPGSHIFSEQFGKPAWELYDGQAVLADRVSRQLLSDHITTPSLDLNPNSLSTNRR 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5902584 5908384 + Carg08405-RA Car02g00816 143302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00816 865 MobiDBLite consensus disorder prediction 34 84 - -
Car02g00816 865 MobiDBLite consensus disorder prediction 286 412 - -
Car02g00816 865 MobiDBLite consensus disorder prediction 789 805 - -
Car02g00816 865 MobiDBLite consensus disorder prediction 377 395 - -
Car02g00816 865 MobiDBLite consensus disorder prediction 286 320 - -
Car02g00816 865 MobiDBLite consensus disorder prediction 24 208 - -
Car02g00816 865 MobiDBLite consensus disorder prediction 105 120 - -
Car02g00816 865 Pfam Protein kinase domain 410 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00816 865 MobiDBLite consensus disorder prediction 172 208 - -
Car02g00816 865 ProSiteProfiles Protein kinase domain profile. 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00816 865 MobiDBLite consensus disorder prediction 679 715 - -
Car02g00816 865 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Car02g00816 865 MobiDBLite consensus disorder prediction 727 762 - -
Car02g00816 865 MobiDBLite consensus disorder prediction 669 805 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00816 Car-Chr2:5902584 Car03g00988 Car-Chr3:7617163 6.94E-137 dispersed
Car04g02247 Car-Chr4:18194981 Car02g00816 Car-Chr2:5902584 5.52E-82 dispersed
Car15g00648 Car-Chr15:3574832 Car02g00816 Car-Chr2:5902584 6.68E-22 dispersed
Car15g00659 Car-Chr15:3664044 Car02g00816 Car-Chr2:5902584 1.19E-79 dispersed
Car16g00103 Car-Chr16:632279 Car02g00816 Car-Chr2:5902584 0 wgd
Car18g01166 Car-Chr18:11408514 Car02g00816 Car-Chr2:5902584 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88664 PF00069 Pkinase 2.00E-70 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00816 K20717 - csv:101222716 1525.76