Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00825 ATGGCTGCCGGAGACGACGACTGGGATCTCTCCGCCGTCGTCCGGAGCTGCTATTCAGGCTCCTCCACGTCCTCCTCCTCCACCGCCGCCGACCCAACTGCCGCTTCCGCCGCAGAAACCGCCTTGTCTTGTCTCGCTTCCTTAACTTTTGACGACGATCCAAACAACGTCGCATTCTCCTTTTCCGACATCCTTCACCCCCAACAGCCCAACGGCTTCCATGAATTACACCAAGCCTTCATTTCTTTCCTCCCCAACCCCGTCGCCCCCGCCGTCGCCCCCGCCGCACCGGAAATCCCCAATCCGGTTCCAACCCGCCAATCCCGACACGGAATTAAACCCATTCGACCACAGCCAGATCCCGGAGCGGTGGCGCTGCAATCCCATCACCGGCAACAGCCACTTTTCCGGCCAGACTTCCCAAATTCACCAATGACGCCTCCTCACATACCCAAATCGAGAAAAAGGCAAAATCAACAGAAGAGAACCGTATGCCATGTGACTGCTGATAATCTCTCAACAGACATGTGGGCTTGGCGTAAATATGGGCAAAAGCCCATTAAAGGATCTCCCTACCCAAGGAACTATTACCGTTGCAGCAGCTCAAAAGGGTGTGGGGCAAGAAAGCAAGTTGAACGGAGCAACGCCGACCCAGAAACTTTCATCGTCACATACACCGGAGATCACACTCATCCACGTCCAACTCATCGGAATTCCCTTGCCGGGAGTTCCCGAAATAGGTCGTCGTCTGCAATTCCCACGAAAAACCTGACAATAGGAGACTCCGATCGGTCATTGCTCGGCACAGCCACCGTGGGCTCTCCGATGACACCGCTTAACGAAGACGGTGGGAGCGGAGAGAAAGAAGGAGAGATTTTGGAGGATTTGAGCATTGATAGTGAGGAGTACGAGGATAATGATATTCTGATTCCAAATTTGATGATGAGAAATGAAATCTTTGTTGGGTTTGAGGAGCTTGGTTGTAGTCCTCGAAGGAAGGCTTGA 1005 53.33 MAAGDDDWDLSAVVRSCYSGSSTSSSSTAADPTAASAAETALSCLASLTFDDDPNNVAFSFSDILHPQQPNGFHELHQAFISFLPNPVAPAVAPAAPEIPNPVPTRQSRHGIKPIRPQPDPGAVALQSHHRQQPLFRPDFPNSPMTPPHIPKSRKRQNQQKRTVCHVTADNLSTDMWAWRKYGQKPIKGSPYPRNYYRCSSSKGCGARKQVERSNADPETFIVTYTGDHTHPRPTHRNSLAGSSRNRSSSAIPTKNLTIGDSDRSLLGTATVGSPMTPLNEDGGSGEKEGEILEDLSIDSEEYEDNDILIPNLMMRNEIFVGFEELGCSPRRKA 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5964206 5965494 + Carg08396-RA Car02g00825 143311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00825 334 Pfam WRKY DNA -binding domain 175 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00825 334 MobiDBLite consensus disorder prediction 225 288 - -
Car02g00825 334 ProSiteProfiles WRKY domain profile. 168 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00825 334 MobiDBLite consensus disorder prediction 236 278 - -
Car02g00825 334 MobiDBLite consensus disorder prediction 114 162 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00825 Car15g00988 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00825 Car-Chr2:5964206 Car06g00922 Car-Chr6:7155072 1.63E-53 dispersed
Car14g01866 Car-Chr14:14469529 Car02g00825 Car-Chr2:5964206 2.80E-47 wgd
Car15g00988 Car-Chr15:7577166 Car02g00825 Car-Chr2:5964206 8.50E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3010 PF03106 WRKY 4.80E-26 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00825 K13425 - cmo:103482922 426.402