Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00839 ATGGGGGATATATCATTGGAAGATGTTAAGAACGAGAACGTTGATCTAGAACGGATTCCTGTGGAGGAAGTTTTTGATCAGTTGAAATGCACGAAGGAAGGATTGAGTACAGCAGAAGGAGAAAAAAGACTCCAAATTTTTGGGCCTAACAAGCTTGAAGAGAAGCAAGAGAGCAAGTTTTTGAAGTTCTTGGGATTCATGTGGAATCCTCTGTCATGGGTCATGGAATGTGCGGCAATCATGGCCATCGTCCTGGCCAATGGAGGAGGGAGACCACCAGATTGGCAAGACTTTGTTGGTATCGTTGTCTTGTTGATCATTAATTCTACCATCAGCTTCATTGAAGAGAACAATGCTGGTAATGCAGCTGCTGCTCTCATGGCTGGTCTTGCCCCTAAAACTAAGGTTCTAAGAGATGGGAAGTGGAAAGAAGAGGAGGCAGCGATTCTGGTTCCAGGAGATGTGATTAGTGTCAAATTGGGAGATATTATCCCGGCCGATGCACGTCTCCTCGATGGCGACCCTTTAAAGATTGATCAGTCTGCTCTTACTGGTGAATCTTTGCCTGTCACCAAGTATCCTGGGGATGAAGTGTTCTCTGGGTCAACTTGTAAGCAAGGTGAGATTGAAGCTGTTGTCATTGCCACTGGTGTGCATACCTTCTTTGGAAAGGCAGCTCATCTTGTGGACAGCACCAACCAAGTTGGTCATTTCCAAAAGGTGTTGACAGCCATTGGAAACTTCTGTATATGCTCGATAGCGGTGGGAATGGTCATCGAGATCTTAGTAATGTATCCAATCCAGAAGAGGCCATACAGAGAAGGAATTGACAACTTGTTGGTGCTTCTCATTGGAGGTATTCCCATTGCTATGCCAACCGTTCTGTCGGTAACCATGGCCATCGGATCGCATCGGCTTTCGCAGCAAGGTGCCATTACAAAGAGAATGACAGCAATTGAAGAGATGGCTGGGATGGATGTCCTGTGCAGTGACAAGACAGGAACTCTCACCCTCAACAAGCTCACGGTGGACAAGTCCCTGATTGAGGTGTTTGTATCAGGCATGAACGAGGATGGTGTTATGTTGTATGCTGCAAGAGCTTCCAGAGTTGAAAATCAAGATGCCATTGATGCCTGCATTGTTGGAATGTTGGCTGACCCCAAAGAGGCAAGGGCAGGAATAACTGAGGTACATTTCTTGCCTTTCAATCCAGTCGATAAGCGTACCGCTATTACCTACATTGACAAAGACGGTAACTGGCACAGAAGCAGCAAGGGTGCTCCTGAACAGATAATTGACCTTTGTGAGCTTAGAGGAGAAATAAGAGAGAAAGCTCATGCCGTTATCGATAACTATGCTAATCGTGGTCTACGTTCCTTGGCAGTTGGTCGACAGACTGTTCAAGATAAGGACAAAGAGAGTGCTGGAGAACCTTGGGAATTTGTTGGTCTCTTGCCCCTATTTGATCCTCCAAGGCATGATAGTGCAGAAACCATCCGTCGAGCTCTCGAACTTGGTGTTAATGTTAAGATGATCACCGGTGACCAACTTGCAATAGGAAAAGAAACTGGTCGAAGGCTCGGTATGGGCACCAACATGTATCCATCATCGTCTTTGCTTGGCCAATCCAAGGATGAGTCTATTGCTTCCATTCCTGTGGATGAACTGATTGAGATGGCTGATGGGTTTGCTGGTGTCTTCCCTGAACATAAGTACGAAATCGTTAAGAAACTTCAGGAGAGGAATCATATTTGTGGCATGACAGGAGATGGTGTCAATGATGCTCCTGCACTCAAGAGAGCCGACATTGGTATTGCTGTGGCCGACGCAACCGATGCAGCAAGAAGTGCATCAGACATTGTCTTGACAGAGCCAGGGCTAAGTGTGATTGTGAGTGCTGTTCTAACCAGCAGAGCCATCTTTCAGAGAATGAAGAACTACACCATCTATGCAGTTTCCATTACAATCCGTATTGTGTTGGGATTCATGCTTGTTGCTCTCATTTGGAAGTTTGATTTCTCGCCTTTTATGGTCTTGATCATTGCCATTCTTAACGATGGAACTATCATGACCATTTCAAAGGACAGGGTCAAGCCATCACCTGTGCCAGACTCATGGAAACTCAAAGAAATCTTTGCTACTGGTGTTGTCCTTGGAACATACATGGCCATCATGAGCGTCATTTTCTTCTGGCTCGCCATTGAAACCAACTTCTTCCCGAGCACATTTGGCGTGAAGCCCCTCAAAGGTATTGCTGAGATCAACTCTGCTCTCTATCTTCAAGTGAGCATCATCAGTCAAGCCCTCATCTTTGTCACAAGGTCAAGAAGCTGGTCCTTTGTTGAATGCCCTGGTTACTTGCTAATTATTGCCTTCATTGCCGCACAGTTGGTTGCCTCTCTAATTGCGGTATATGCTGAATGGGACTTTGCAAGGATTAAAGGCATTGGTTGGGGATGGGCAGGAGCCATCTGGGTATACAGTATTGTTACTTACTTCCCTCTTGATATTCTCAAATTCACAATCCGATACGCCCTCAGCGGCAAGGCCTGGGACAACATGCTCGACAATAAGACAGCCTTTACAACCAAGAAGGATTACGGAATAGGCGAAAGAGAAGCACAATGGGCAACAGAACAACGGACGATGCACGGCCTGCAGCCACCAGAAACCATATTTCATGAGAGTAGCAGCCACGAGGATCATTCAGAGATTGCTGAGCAAGCCAAGAAAAGAGCTGAAATTGCAAGGCTGAGGGAACTGCACACTCTAAAGGGCCATGTGGAATCAGTGGTGAAGTTGAAGGGGTTGGACATTGAGACTATCCAACAACACTACACTGTTTAA 2847 46.08 MGDISLEDVKNENVDLERIPVEEVFDQLKCTKEGLSTAEGEKRLQIFGPNKLEEKQESKFLKFLGFMWNPLSWVMECAAIMAIVLANGGGRPPDWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWKEEEAAILVPGDVISVKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKYPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVIEILVMYPIQKRPYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFVSGMNEDGVMLYAARASRVENQDAIDACIVGMLADPKEARAGITEVHFLPFNPVDKRTAITYIDKDGNWHRSSKGAPEQIIDLCELRGEIREKAHAVIDNYANRGLRSLAVGRQTVQDKDKESAGEPWEFVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASIPVDELIEMADGFAGVFPEHKYEIVKKLQERNHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGVVLGTYMAIMSVIFFWLAIETNFFPSTFGVKPLKGIAEINSALYLQVSIISQALIFVTRSRSWSFVECPGYLLIIAFIAAQLVASLIAVYAEWDFARIKGIGWGWAGAIWVYSIVTYFPLDILKFTIRYALSGKAWDNMLDNKTAFTTKKDYGIGEREAQWATEQRTMHGLQPPETIFHESSSHEDHSEIAEQAKKRAEIARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 948
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6060705 6064564 - Carg14104-RA Car02g00839 143325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00839 948 Pfam E1-E2 ATPase 131 308 - -
Car02g00839 948 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Car02g00839 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Car02g00839 948 Pfam haloacid dehalogenase-like hydrolase 325 602 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00839 Car-Chr2:6060705 Car12g00275 Car-Chr12:1821076 0 dispersed
Car14g01193 Car-Chr14:10462319 Car02g00839 Car-Chr2:6060705 0 dispersed
Car10g00450 Car-Chr10:2261931 Car02g00839 Car-Chr2:6060705 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00839 K01535 - csv:101214655 1730.3