Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00850 ATGGCGGAAAAGGACAGAGACGGTCAGTCTGGTGTTCTCCATGGAAAGTATGAACTAGGTCGGCTTCTAGGGCATGGTACTTTTGCGAAGGTTTATCATGCCCGGAATTTGAAGACGGGGACGAACATGGCGATGAAGGTGGTTGGGAAGGAGAAAGTGATAAAAGTAGGCATGATGGAGCAGATCAAGAGGGAGATCTCTGTAATGAAGATGGTGAAGCATCCGAATATCGTCGAGCTTCATGAGGTTATGGCGAGCAAATCCAAGATCTATTTCGCGATGGAGCTTGTTCGCGGAGGGGAACTGTTCTCCAAAATTTCCAGAGGTCGATTGAGAGAAGATTTGGCTAGACTTTACTTTCAGCAGCTGATTTCTGCGATCGATTTTTGCCACAGCCGTGGAGTTTATCATCGGGACCTCAAACCGGAGAATCTTCTTCTCGACGACGACGGAAATCTTAAGGTAACTGATTTTGGACTCAGCGCATTTTCAGAGCATCTGAAACAGGATGGACTGTTGCACACAACTTGTGGCACGCCGGCGTATGTTGCGCCGGAAGTAATTGGGAAGAAGGGATACAACGGCGCCAAAGCTGATCTGTGGTCATGTGGAGTCATCCTTTACGTTCTTCTCGCCGGATTTCTCCCATTTCAAGACGACAATATTGTGTCGATGTACAGGAAGATTTACAGAGGAGACTTCAAGTGCCCGCCGTGGTTCTCACCGGAAGCCCGTCGATTAATAACCAAACTCCTGGATCCGAATCCGAGCAGCAGAATTACAACATCAAAGATCATGGAGTCCTCCTGGTTCAGGAAATCCACGCCGAGGACTGTAATAACAAAAGAGGAGCAGGAATTCGACGAGAGCAAGGAGAAATTGAAGCAATCGGAGACGTTAAATGCCTTCCATATAATTTCCTTATCGGAAGGGTTCGATTTATCACCGTTGTTCGAGGAGAAAAAGAGAGAAGAGAAAGAGGAGCTGAGATTTGCGACGACAAGGCCCGCAAGCAGTGTGATATCGAAGCTGGAAGAGGTGGCGAAGGCGGGGAAATTCAGCGTAAAAAAGAGCGAATCAAGAGTGAGATTACAGGGTGAAGCGTGCGGAAGAAAAGGGAAACTAGCGGTGGCGGCGGAGATCTTCGCCGTAACGCCGTCGTTTCTGGTGGTAGAGGTGAAGAAAGATCACGGGGACACGTTAGAATACAGGCAGTTCTGCAGCAAAGAGCTCCGGCCGGCGCTGAAAGACATTGTGTGGACATCACCAACGGAGAAGACAGTGTCGGGTTGA 1293 48.8 MAEKDRDGQSGVLHGKYELGRLLGHGTFAKVYHARNLKTGTNMAMKVVGKEKVIKVGMMEQIKREISVMKMVKHPNIVELHEVMASKSKIYFAMELVRGGELFSKISRGRLREDLARLYFQQLISAIDFCHSRGVYHRDLKPENLLLDDDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVIGKKGYNGAKADLWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSPEARRLITKLLDPNPSSRITTSKIMESSWFRKSTPRTVITKEEQEFDESKEKLKQSETLNAFHIISLSEGFDLSPLFEEKKREEKEELRFATTRPASSVISKLEEVAKAGKFSVKKSESRVRLQGEACGRKGKLAVAAEIFAVTPSFLVVEVKKDHGDTLEYRQFCSKELRPALKDIVWTSPTEKTVSG 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6128779 6130071 - Carg14093-RA Car02g00850 143336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00850 430 PANTHER - 8 426 - -
Car02g00850 430 Gene3D Kinase associated domain 1, KA1 299 421 - -
Car02g00850 430 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Car02g00850 430 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00850 430 CDD STKc_SnRK3 16 270 - -
Car02g00850 430 SUPERFAMILY Protein kinase-like (PK-like) 13 285 IPR011009 -
Car02g00850 430 Gene3D Phosphorylase Kinase; domain 1 14 98 - -
Car02g00850 430 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 426 - -
Car02g00850 430 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Car02g00850 430 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00850 430 Pfam NAF domain 298 357 IPR004041 GO:0007165
Car02g00850 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Car02g00850 430 Gene3D Transferase(Phosphotransferase) domain 1 99 298 - -
Car02g00850 430 CDD CIPK_C 301 416 - -
Car02g00850 430 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00850 430 Coils Coil 280 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00850 Car-Chr2:6128779 Car12g01122 Car-Chr12:10933078 0 dispersed
Car01g01275 Car-Chr1:11561646 Car02g00850 Car-Chr2:6128779 8.62E-180 wgd
Car10g00439 Car-Chr10:2206179 Car02g00850 Car-Chr2:6128779 0 wgd
Car02g00850 Car-Chr2:6128779 Car09g00364 Car-Chr9:1988779 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88665 PF00069 Pkinase 2.30E-73 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00850 - K07198 csv:101211847 808.905