Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00856 ATGGCGGAGCCGGAAGGGTTTGATTCTAATCAACTCGGAAGCTCGAAGGCTTCTGCAGAGCAACAGGATGACGAGGAAGAAGAAATGGAAGATTCAGAGAATGAATCAGAGGTGGAGTTGGAGGAACATAAACTGAGTGAGTTGAGGACAGGTTCGTTGGTTAGTGAAGCTGCAGTGAAGGGGTCTTGCTCTCAAACCCTAGCGCCGCCTTCTGCGAATCAGTCCTCGGAGAACGGTCGGTCTGATGGCTTGCCTAACAATTCTGCTGCCGAGTCACTCGAAGGAGTTGAATTGAAGCATCAAGCTCCATCTGCCAGCAATGTTGAAGCAATCCAGACAGATCAGGTACAAGAACAAAGCCAACTTCAGATAATAGTATATAAAGGACCTGATTCAGAACAATCACCAACTTCAGTTACTCAGTCTATCTCATCCTCTGCTAGTCCAAGTTTATCCGAATATAAACTGGTACCTAAGAAGGTCCATAAAGAATGTAAGCCAGAACCAAGCCAGAAAAATTCTTCCGACCGTAAAACTGTGTTCTCTGTTCCCAATGTTAGGACACCTGCTTCTGATGGTTACAATTGGAGGAAATATGGTCAGAAGCAAGTGAAGATTCCAAAGGGTTCACGGAGCTATTACAAGTGTACATATTCTGGATGCTGTGCTAAGAAGATTGAATGTTGTGATCACTCTGGCCTTGTAACAGAGGTTGTTTACAAGAGCCAACATAGCCATGATCCTCCTAGGAAGATTAGCAACCCCAAGGAAAGTATGCTTGTGCCTTATGTTGAGCCTGTGGTTAAAAAAATCATGGCTGAACATTCCGTAAGAATAATTAACGATTCAGATCCTCCTATGTCTTCAAAAGAACCGTTACGGGAAACAGCTTCAGTCGTTGAAAGAAAACGACAGTTCTCTAATGACTCTGACGGAAATGATGAATCTAAAATCAAGAATGAGAATGACAACGAATACGAAACAAAACAAAAAGTTAAGAAGAGCAGTGGGGGATATTCAGGCACTCCCCTAAAACCTGGAAAGAAGCCCAAGTTTGTGGTACATGCAGCGGGTGATGTGGGAATCTCAGGTGACGGATACAGATGGCGTAAGTATGGTCAGAAAATGGTGAAAGGAAATCCTCATCCTAGGAACTACTACCGATGTACCTCTGCTGGGTGTCCAGTCCGTAAGCATATCGAATCAGCTGTAGAAAATCCAAGCGTAGTGATTATAACATACAAGGGAGTTCATGATCACGACATGCCAGTACCGAAGAAACGACACGGTCCACCTAGTGCGCCTCTTGTAGCTGCTGCAGCTCCTGCCTCCATGGGCAATATGCAACCAAAGAAAACAGACGCAGTTCAGAGCCAAATTTCTTCAACACAATGGTCTGTGGATGCTGAAGGAGAGTTGACTGGTGAGGCCTTGGATCTTGGAGGTGAGAAAGCAATGGAATCTGCCCGAACACTTTTGAGCATTGGATTTGAAATCAAGCCTTGCTGA 1509 44.73 MAEPEGFDSNQLGSSKASAEQQDDEEEEMEDSENESEVELEEHKLSELRTGSLVSEAAVKGSCSQTLAPPSANQSSENGRSDGLPNNSAAESLEGVELKHQAPSASNVEAIQTDQVQEQSQLQIIVYKGPDSEQSPTSVTQSISSSASPSLSEYKLVPKKVHKECKPEPSQKNSSDRKTVFSVPNVRTPASDGYNWRKYGQKQVKIPKGSRSYYKCTYSGCCAKKIECCDHSGLVTEVVYKSQHSHDPPRKISNPKESMLVPYVEPVVKKIMAEHSVRIINDSDPPMSSKEPLRETASVVERKRQFSNDSDGNDESKIKNENDNEYETKQKVKKSSGGYSGTPLKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVENPSVVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMGNMQPKKTDAVQSQISSTQWSVDAEGELTGEALDLGGEKAMESARTLLSIGFEIKPC 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6165402 6170183 + Carg14087-RA Car02g00856 143342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00856 502 MobiDBLite consensus disorder prediction 156 173 - -
Car02g00856 502 ProSiteProfiles WRKY domain profile. 358 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00856 502 MobiDBLite consensus disorder prediction 1 186 - -
Car02g00856 502 MobiDBLite consensus disorder prediction 295 332 - -
Car02g00856 502 Pfam WRKY DNA -binding domain 192 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00856 502 Pfam WRKY DNA -binding domain 365 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00856 502 MobiDBLite consensus disorder prediction 280 350 - -
Car02g00856 502 MobiDBLite consensus disorder prediction 21 37 - -
Car02g00856 502 MobiDBLite consensus disorder prediction 57 88 - -
Car02g00856 502 MobiDBLite consensus disorder prediction 105 152 - -
Car02g00856 502 ProSiteProfiles WRKY domain profile. 191 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00856 502 Coils Coil 15 42 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00856 Car-Chr2:6165402 Car14g00022 Car-Chr14:149155 1.59E-15 dispersed
Car10g00431 Car-Chr10:2149622 Car02g00856 Car-Chr2:6165402 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3014 PF03106 WRKY 3.70E-24 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00856 - - bhj:120071353 765.377