Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00864 ATGCAGCAAGCTGATCGGACGGTTCTAAGCTTGAGACCTGGTGGCGGTCGACCTAGACTCCTTGGTCCTCGCTTTGAGCATTCATCCTCCTCTTCCTCATCGTCTTCATCTTCTTTTACCTTCGGCTCATTTTCCTCTGATCTTTCCACCCTCCCACCCCATGGCGGGCCTTCCGCTTCATTGTCTGTGAATGCTGAAGATTCACGGTTTGAGGGTCGTGAGCGTGTTCGATATACCCGAGATCAGCTTTTGCGGCTTCGAGTGCAGCTTCGAGAGGCTGTGGAAGTTCCAGATGATATACTAAAACTTAAACGGGATCTTGAAGTGGAAATTTTTGGCGAGGAACAAAGTTGGAGTCGTGGAGAGAGCAATGGATGGTGGAAGGTGGTTCGTAAGAGGTCATTAGTATTTAAGCAACCTAATCAGTCTCAGAATCGCTATTCTGAGCCAGACAGTCGTGACTGGCGTGGCCGTTCTGCCCAATTCTCTGCTTTTGGAGAGGAGAGGTCCAGGGAAACAAATCGAGATAGAGATGTTGGTGGTCATTTTGACTCTAGACAGCAAGACGCAAACCAATTCAATCGTCAAGAGCATTGGACCAGGACCACTTCTAACCAAGGGGGAGGACTTCCCGCTTTAATCAAAGCTGAGGTTCCATGGTCAGCTAGGAGAGGAAATCTTTCTGAAAAGGATCGTGTCTTGAAGACTGTAAAGGGGATATTGAACAAGCTAACACCAGAAAAGTTCGATCTCCTCAAGGGTCAGCTAATGGACTCCGGAATCACCTCCGCTGATATTTTGAAGGATGTCATTTCACTGATTTTTGATAAGGCTGTTCTCGAGCCCACATTTTGCCCCATGTATGCCCAATTGTGTTCTGATCTGAATCAGAAGCTACCTCAATTTCCCTCCGATGAACCTGGTGGAAGGGAAATTACTTTTAAACGAGTCCTCTTAAATATCTGTCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTAGGCAGATGATTGCCCCTGAGCAAGAGAGCGAGCGCAGAGATAAAGAAAGACTGATCAAACTTCGTACTCTTGGAAATATTCGATTAATTGGAGAGCTTCTGAAGCAAAAGATGGTGCCTGAGAAGATTGTCCACCACATCGTGCAGGAACTTTTAGGACCAGATAACAAAATCTGTCCTGCTGAAGAAAATGTGGAGGCCATCTGTCAGTTCTTTAACACCATAGGTAAGCAGCTAGACGAGAATACAAAATCGCGGCGTATAAATGACATGTACTTTGGCCGATTGAAAGAATTGACTACACTCCCTCAGTTGGCTCCACGTTTGAAGTTCATGGTCCGCGATGTTCTTGATTTGCGAGCTAACAATTGGGTACCTAGGCGTGAAGAGGTTAAAGCCAAAACTATTACTGAAATACATTCAGAGGCAGAAAAAAATCTGGGACTACGTCCTGGTACTACTATCAATATCAGAAATAGTCGTGGTGTTGTGTCTGGCTCTCCTGGGAACACCAGCCCTGGGGGCTTTCCTATCAATCGACCTGGTTTGGGGGGTATGATGCCGGGCATGCCAGGAACCAGGAAGATGCCTGGTATGCCAGGAATGGATAATGACAATTGGGAGGTTCCTAGGGCCCGTACTGTACCTAGGGGGGCAAACGGATCTGGTATGCAGCCTTCTGGACGTGGCCAGACACAGTTGATTGGCAAAGCATCAACCTTGAATGCGAGGCTACTACCCCAGAGTTCTGGTGGCCTCATTAGTAACAAGACTAGTGCTCAATTGCAGGGTGCAGGAGCATCTACTACTCGTCCTATTAACTTCGGTCAAGGGTTGGGTCATAAACCTATTACGGCAGCAATGGTCCTTCCACCTGCTGAGAGACCACAGGTTCCAGCTGCATCTTTAAAACAAGTTGATCTCAAAAAGAAAACTCTCTCTCTTCTTGAAGAATATTTTAGTATCCGGATTTTGGATGAGGCTTTACAGTGCGTGGAAGAACTCATGTCACCAGCTTACCATCCTGAAGTTGTAAAAGAAGCCATTTCTTTAGCCCTAGAGAAAAGCCCACCCTGTGTTGAAGCAGTCGTAAAGTTTCTGGCCTATTTACTCTCCAGGAAGGTTTTTACTGCTGGAGACATTGAGACTGGATGTTTGCTATATGCTTCTGTGCTCGACGACGCAGGCATTGATTTACCAAAAGCCCCAATCAATTTCGGAGTGATAATTGGGAAACTTGTTATATCTGGTAGTTTGGATTTTCAGGTGGTGAAGGAGCTCCTTAAGAAGGTGGAAGATGACAGGTTCAGGAAAGACATATTTGATGCTGTCTTGCAGACCCTAAGTTCTGATGTGTCTGGACAAGGATTACTGGATTCACTGGCATCCTATATCGAGGCCTGTCGAAGTCTAGCATGTTAA 2430 46.34 MQQADRTVLSLRPGGGRPRLLGPRFEHSSSSSSSSSSSFTFGSFSSDLSTLPPHGGPSASLSVNAEDSRFEGRERVRYTRDQLLRLRVQLREAVEVPDDILKLKRDLEVEIFGEEQSWSRGESNGWWKVVRKRSLVFKQPNQSQNRYSEPDSRDWRGRSAQFSAFGEERSRETNRDRDVGGHFDSRQQDANQFNRQEHWTRTTSNQGGGLPALIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLMDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMIAPEQESERRDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNKICPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLKELTTLPQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGTTINIRNSRGVVSGSPGNTSPGGFPINRPGLGGMMPGMPGTRKMPGMPGMDNDNWEVPRARTVPRGANGSGMQPSGRGQTQLIGKASTLNARLLPQSSGGLISNKTSAQLQGAGASTTRPINFGQGLGHKPITAAMVLPPAERPQVPAASLKQVDLKKKTLSLLEEYFSIRILDEALQCVEELMSPAYHPEVVKEAISLALEKSPPCVEAVVKFLAYLLSRKVFTAGDIETGCLLYASVLDDAGIDLPKAPINFGVIIGKLVISGSLDFQVVKELLKKVEDDRFRKDIFDAVLQTLSSDVSGQGLLDSLASYIEACRSLAC 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6197969 6204429 - Carg14079-RA Car02g00864 143350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00864 809 MobiDBLite consensus disorder prediction 487 517 - -
Car02g00864 809 MobiDBLite consensus disorder prediction 25 43 - -
Car02g00864 809 MobiDBLite consensus disorder prediction 488 510 - -
Car02g00864 809 MobiDBLite consensus disorder prediction 168 184 - -
Car02g00864 809 Pfam MIF4G domain 234 459 IPR003890 GO:0003723|GO:0005515
Car02g00864 809 ProSiteProfiles MI domain profile. 643 765 IPR003891 -
Car02g00864 809 Pfam MA3 domain 644 756 IPR003891 -
Car02g00864 809 MobiDBLite consensus disorder prediction 163 191 - -
Car02g00864 809 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00864 Car-Chr2:6197969 Car08g00895 Car-Chr8:6000321 1.72E-63 dispersed
Car01g01290 Car-Chr1:11635799 Car02g00864 Car-Chr2:6197969 0 wgd
Car10g00422 Car-Chr10:2117841 Car02g00864 Car-Chr2:6197969 0 wgd
Car02g00864 Car-Chr2:6197969 Car09g00352 Car-Chr9:1924537 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00864 K03260 - csv:101207520 1270.37