Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00866 ATGGATGTATGTGAATCGGCGCGGGCATTTAGAAAGCATACAGTAGCTGCGGCGCCAAGACAACCGTTGGTTCCTGCAGAAAAGAACAATGAAGTTATCACACGGTTTCCCTCGTGTTCCAAGAAAATGTCATCTTCTCCTTCATCGTTGTCTGGTCCTCGGCGTTGCCCATCACCAAGCATCACGCGGACGGTTCATACATCCTCCCAATTGGTTCTTAAAAGAGCTCAATCAGCAGAGAGGAAGCGACCGTCCACACCCCCTTCTCCAAGCCCGGCCGCACCGATTGATGGTTCACCAGCAGATTTACAGTTGCTATCGAAAAGAATGATTAGTGGTCGACCTGATAGCTTATGGCCCTCTACGATGAGAAGTTTGAGCGTCTCATTCCAATCTGATACAATTTCTATTCCTGTTAGTAAGAAGGAAAAACCCGTGTTATCATCTCCTTCTGATCGAACTCTTAGGCCTTCTTCCAATTTTCCTTCTAAGCAGGCCGAGACGCAAACTGTTGCAAGGAAGTCCGCGCCAGAAAGAAAGAGGAGTCCACTTAGAGGTAAAAATGGACACGATCAATCAGAGAATTTCAAACCAGTTGCTGGGTCACGTACCCAATTCATAGATCAGCATAGATGGCCTAGTCGAATTGGTGCGAAAGCATCCTCCAATTCATTAAATTGTTGCGTGGATCTCGCCGATAAAAGAGTCCCAATCTTAAATAAGCCACTTAGAGGAAGCGCATTATCTTGTACGGTCGAGACTGTTAGCAAACCTTTACAGAAATCGTCCAGTGGTGTTATGAGGCTATCATATGTTGATGGAAGGAGTAGAAAAGAATTTGAGGCAAATTCAGCCAATGACAATTCAATGCAGGAATCTGCAGCTAACAAGGTTGTTTCGTCAAGTTTATCCGACATAAAAATAACAACAAACCGAGTTGTGAGATATGACTCGCCTACTCTTGTCCCACGTCCATCCTCTGTTACTAGAAGAGCTAGTCCATCTCGAATGACACCATCAACTCCAACTCCTCGAGCAATTAGCTCATCACGAATCAGACCTTCAAATGCTACTCAACCCAATGTTTCGACTTCTGTTCTTAGTTTCATAGCAGATTTTAAGAAGGGAAAGAAGGCTACAAGCTATATAGAAGGTGCTCATCAGCTACGGCTTCTATACAATAGACATTTGCAATGGAGATGTGCTAATGCCCGCGCAGAGGCTGTTCTGCGTAATCAGGAGGTGGCGGCAGAGAGAACTCTTCTTGGCGTATGGAATACTACACTAAATCTGTGGGATTCAGTAATCAAAAAAAGGATCAATCTCCAACAGCTGAAGCTAGAGCTCAAGTTGATTTCGGTTATGAATGATCAAATGAGCTACCTCAACGAATGGGCAGTGCTTGAAAGAAGTCATAATGGATCCTTATCAGGTGTTATAGACGATTTGGAGTCGAGCACTCTTCGTGTTCCATTGACTGGAGGAGCAAAAGTAGATGGGGGCTCTTTAAATGATGCTATTTTTTCAGCCGTTGAGGTGATGCAAGCAATGGGATCCTCCATTTGCTCCATGCTCCCAAGGGTGGAGATAATGCAGACGTTGGTTATTGAACTTGCAATTTTAGCAGCCCAAGAAAAGGCTATGCTTGATGAATGTATAGCATTGTTGGCATCAACAGCAGCTTTGCAGCAAATCAACACAGTCTTCGACATCAACGTCAACGCCATTCTGAACGTAATGGCCGAGGCCAAGTGCAGGGGTGAAGAACACTCTGGCGGCGCTGGCGGCGGTCCTTCGATGAGTCACGATAATATGCCTGGTCGGGCTCCCTCCGAGTTCGCCGGTGGTTCTGGACCGAAGATTGAGGAGGAAGCTGAACTTCAATGGGACTTTGACACAGCAACCAACTCACCACCCATTTCATCAGACACATTAGCCATGGAAGCCAGCGCGGGACTTGTCGCTGGTTCTCATAACCGCAATGAGCTTGTTGTCATTCATGGCCATGAGGAGCCGAAGCCATTGAAGAACTTGGATGGTCAAGTTTGTGAGATATGTGGCGACGAAGTGGGGCTTACTGTGGATGGTGATCTGTTTGTTGCCTGCAATGAATGTGGTTTTCCAGTCTGCAGACCTTGTTATGAGTATGAAAGAAGAGAAGGAAGCCAACTGTGTCCTCAGTGTAAAACTAGATATAAGCGACTTAAAGGGAGTCCGAGGGTCGAGGGAGATGATGATGAAGAAGACATAGATGACATTGAACATGAATTCAACATCGATGATGAGAGGAATAAGCACAGTCATATGGCAGAAGCTATGCTTCATGGAAAGATGAGCTACGGTAGAGGGCCAAATGATGATGAAAATGCACAGTATGGAAGAACAGAGCCAGAAAATGTTGAGCTTCCTTTATCATCCCAGGGTTATGGAGATCAGATATCATCTTCTTCACTGCACAAACGAGTGCATCCATTTCCAGCTTCTGAACCAGGCAGTGGAAGATGGGATGAAAAGAGAGAGGAAGGTTGGAAAGATAGAATGGATGATTGGAAATTGCAGCAAGGCAATCTTGGGCCTGAACCTGATGATGCCAATGACCCTGACATGGCTATGATTGATGCAGCTAGACAGCCACTATCAAGGAAGGTACCAATAGCATCTAGCAAAATTAATCCTTACCGAATGGTTATTGTGGCTCGGCTCGTTATTCTTGCCTTCTTCCTTCGGTATCGGATTCTAAATCCAGTGCATGATGCATTGGGTTTGTGGCTAACTTCTGTGATATGTGAAATCTGGTTTGCATTTTCGTGGATCCTCGATCAGTTCCCCAAATGGTTCCCAATCGATCGTGAAACCTACTTGGATCGTCTGTCCCTCAGGTATGAACGAGAGGGTGAACCTAATTTGCTTGCTGCAGTGGACATTTTTGTCAGTACTGTTGATCCGATGAAGGAACCTCCTCTTGTAACAGCTAACACAATCTTATCTATCTTGGCCATGGACTATCCAGTTGATAAGGTTTCATGCTACGTTTCAGATGATGGAGCTTCCATGCTTACCTTCGAAGCAATGTCTGAAACTGCAGAATTTGCCAGGAAATGGGTGCCCTTCTGTAAGAAGTTTTCGATAGAACCTCGAGCACCTGAAATGTACTTTTGTGAGAAGATCGATTATCTCAAGGATAAAGTCCAACCAACGTTTGTAAAGGAGCGTCGAGCAATGAAGAGAGAATATGAAGAATTCAAGGTCAGGATAAATGCCCAAGTAGCAAAAGCCATAAAAGTTCCCACAGAAGGATGGATAATGCAAGATGGAACACCATGGCCAGGCAACAACACAAAAGATCACCCTGGTATGATCCAAGTCTTTCTGGGTCACAGTGGAGGCCTTGATGCAGAAGGGAATGAACTCCCCCGCTTAGTGTACGTATCTCGTGAGAAAAGACCAGGTTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCCTTGATTCGTGTATCTGCAGTGCTTACAAACGCTCCATTCATGTTGAACTTGGATTGTGATCACTACATAAACAATAGCAAAGCAGCAAGAGAGGCAATGTGTTTCCTTATGGACCCTCAAGTTGGAAAGAAAATTAACATGCGAGGTTTAGATGGAATTCAGGGACCTGTCTATGTCGGAACAGGGTGTGTCTTCAGGAGACAGGCTTTATATGGTTATGAACCCCCAAAAGGACCGAAGCGCCAAAAAATGGTATGCTGTGACTGTTGTCCATGCTTTGGACGTCGCAAGAAGCTTAAGAGCTCTAAAAGTGGGGTAGATGGAGATGCTGCAGCGATGGAAGATAACAAGGAGCTGCTAATGTCGCAAATGAATTTCGAAAAGAAATTTGGGCAGTCATCAATTTTTGTTACCTCGACTTTGATGGAAGAAGGTGGTGTTCCACCCTCCTCGGGTCCAGCGGCCCTACTTAAGGAAGCAATTCATGTTATCAGTTGCGGTTATGAAGACAAAACCGAATGGGGTACAGAGTTGGGCTGGATTTATGGGTCGATCACAGAAGATATTCTAACAGGTTTCAAGATGCATTGTCGTGGCTGGAGATCTATATACTGCATGCCAAAGAGACCTGCATTTAAGGGTACAGCTCCCATTAACTTGTCTGACCGGCTGAACCAGGTGCTTCGTTGGGCACTCGGGTCTATTGAAATCTTTTTCAGCAACCACTGCCCTGTTTGGTATGGTTATAAGGGTGGGAAGCTAAAGTGGCTAGAGAGATTTGCATACGTCAACACAACTGTCTACCCCTTCACTTCAATACCACTTCTCGCTTACTGTACCCTCCCTGCGATCTGCCTGCTCACCGATAAGTTTATCATGCCACCGATAAGCACTTTTGCAAGTCTCTACTTCATTGCCTTGTTTCTTTCCATTTTTGCTACGGGTATTCTAGAGCTTAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTATTTCAGCTCATCTATTTGCTGTTGTTCAAGGTCTATTGAAGGTTCTGGCTGGAATTGATACTAGCTTCACAGTTACATCCAAGGCAACAGATGACGAAGATTTTGGAGAATTATATGCCTTTAAGTGGACCACTCTACTAATCCCTCCAACAACTATTTTGATCATCAACCTTGTTGGGGTTGTTGCAGGCATCTCAGATGCCATAAACAATGGCTATCAATCATGGGGACCCCTATTTGGGAAGCTTTTCTTTGCCTTCTGGGTGATTGTCCATCTCTACCCATTCCTTAAGGGTCTGATGGGCCGACAAAACCGCACACCGACTATAGTCGTCATATGGTCCGTGCTGTTGGCTTCAATCTTCTCCTTGCTTTGGGTTCGAATTGATCCATTTGTGATGAAAACAAAGGGACCAGATACCAAGCAATGTGGACTAAATTGCTGA 4953 45.08 MDVCESARAFRKHTVAAAPRQPLVPAEKNNEVITRFPSCSKKMSSSPSSLSGPRRCPSPSITRTVHTSSQLVLKRAQSAERKRPSTPPSPSPAAPIDGSPADLQLLSKRMISGRPDSLWPSTMRSLSVSFQSDTISIPVSKKEKPVLSSPSDRTLRPSSNFPSKQAETQTVARKSAPERKRSPLRGKNGHDQSENFKPVAGSRTQFIDQHRWPSRIGAKASSNSLNCCVDLADKRVPILNKPLRGSALSCTVETVSKPLQKSSSGVMRLSYVDGRSRKEFEANSANDNSMQESAANKVVSSSLSDIKITTNRVVRYDSPTLVPRPSSVTRRASPSRMTPSTPTPRAISSSRIRPSNATQPNVSTSVLSFIADFKKGKKATSYIEGAHQLRLLYNRHLQWRCANARAEAVLRNQEVAAERTLLGVWNTTLNLWDSVIKKRINLQQLKLELKLISVMNDQMSYLNEWAVLERSHNGSLSGVIDDLESSTLRVPLTGGAKVDGGSLNDAIFSAVEVMQAMGSSICSMLPRVEIMQTLVIELAILAAQEKAMLDECIALLASTAALQQINTVFDINVNAILNVMAEAKCRGEEHSGGAGGGPSMSHDNMPGRAPSEFAGGSGPKIEEEAELQWDFDTATNSPPISSDTLAMEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDEVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDDDEEDIDDIEHEFNIDDERNKHSHMAEAMLHGKMSYGRGPNDDENAQYGRTEPENVELPLSSQGYGDQISSSSLHKRVHPFPASEPGSGRWDEKREEGWKDRMDDWKLQQGNLGPEPDDANDPDMAMIDAARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNLLAAVDIFVSTVDPMKEPPLVTANTILSILAMDYPVDKVSCYVSDDGASMLTFEAMSETAEFARKWVPFCKKFSIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINAQVAKAIKVPTEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAAREAMCFLMDPQVGKKINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRQKMVCCDCCPCFGRRKKLKSSKSGVDGDAAAMEDNKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSGPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSNHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCTLPAICLLTDKFIMPPISTFASLYFIALFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKVLAGIDTSFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQCGLNC 1650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6208790 6218731 - Carg14077-RA Car02g00866 143352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00866 1650 MobiDBLite consensus disorder prediction 587 618 - -
Car02g00866 1650 MobiDBLite consensus disorder prediction 140 200 - -
Car02g00866 1650 MobiDBLite consensus disorder prediction 35 75 - -
Car02g00866 1650 MobiDBLite consensus disorder prediction 173 192 - -
Car02g00866 1650 Pfam Zinc-binding RING-finger 673 749 IPR027934 -
Car02g00866 1650 Pfam Cellulose synthase 1207 1644 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car02g00866 1650 MobiDBLite consensus disorder prediction 151 172 - -
Car02g00866 1650 MobiDBLite consensus disorder prediction 35 100 - -
Car02g00866 1650 ProSiteProfiles Zinc finger RING-type profile. 683 729 IPR001841 -
Car02g00866 1650 MobiDBLite consensus disorder prediction 805 840 - -
Car02g00866 1650 MobiDBLite consensus disorder prediction 805 821 - -
Car02g00866 1650 Pfam QWRF family 257 550 IPR007573 -
Car02g00866 1650 MobiDBLite consensus disorder prediction 319 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00866 Car-Chr2:6208790 Car04g01268 Car-Chr4:7351698 0 dispersed
Car05g00907 Car-Chr5:8831253 Car02g00866 Car-Chr2:6208790 3.64E-56 dispersed
Car09g00410 Car-Chr9:2268869 Car02g00866 Car-Chr2:6208790 7.88E-45 dispersed
Car19g00416 Car-Chr19:6020794 Car02g00866 Car-Chr2:6208790 1.68E-08 dispersed
Car10g00418 Car-Chr10:2104907 Car02g00866 Car-Chr2:6208790 8.87E-53 transposed
Car10g00420 Car-Chr10:2110337 Car02g00866 Car-Chr2:6208790 0 transposed
Car17g01273 Car-Chr17:9663661 Car02g00866 Car-Chr2:6208790 0 transposed
Car10g00417 Car-Chr10:2102028 Car02g00866 Car-Chr2:6208790 0 wgd
Car12g00759 Car-Chr12:7307609 Car02g00866 Car-Chr2:6208790 6.42E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00866 K10999 - csv:101214842 1970.67