Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00892 ATGGGCATGGAACTGAGGAAGGAAAAGCTTGTTAGGTTTTATTCTGATCACAAAAAACATAAGAAATCTTCCATTGGGAACAACAATGAAGCAGGGCAACTTGAGAAGTCATCATCGAAATACTATATTCCATCGTCGACATTCTTAATACCTGACAATGGATTAGGGGCAAGCAAAAGTAAATCTGCTGAAACTTTTAGAACTGAGAAGTCCAAAGTGTTTCCAGAGGACCATGAGCCATGGAGCAGAAGAATACTAGACCCTGGCAGAAAAATTGTTTTGAAATGGAACCGGGTGTTCATTTGCTCATGTTTATTGGCACTCTTTGTTGACCCGTTGTACCTTTACTTGCCATCTTTGGCTGGGAATGGGAAATCCTCGTGTGTGAGGACAGACTGGAAATTGCGAATTGTTGTGACCTGTTTCCGGACTGTTGCAGATTTTTTCTATCTTCTGCACATGATTATCAAGTTCAGAACAGCTTATGTTGCTCCTAGCTCTCGAGTTTTTGGGAGAGGTGAGCTTGTGATGGATTCGAAGATGATAGCAAAGAGGTATCTTAGATCTGACTTTTTTGTCGATCTAATTGCCACGTTGCCTCTCCCTCAGATTGTCATCTGGTTTATCATACCCGCAACAAGAAGTCGTCTAACTGATCATAAAAACAATGCGCTTGCGCTTATTGTTCTGCTTCAATATATTCCGAGATTGTATTTGATTTTCCCTCTTAGTTCAGAGATCATCAAAGCGAATGGAGTTGTTACAAAAACTGCTTGGGCAGGAGCTGCTTATAATCTTCTACTCTATATGTTGGCTAGCCATGTTCTAGGTGCTATATGGTATTTGCTGTCAGTTGATAGATATACATCATGCTGGAAATCATTATGTAGGAAGAAGGAATATAATCCACTAGAATGCAATCCAACTTTTTTTGATTGCGATACACTTAACCTTATTGACCGCAATACATGGGCTAATAGTACACTTGTTTTCGACAAATGTGGCCCTAGTGGAATTTTCAAGTATGGCATTTTTGGGAATGCAATGTCAAAGAATGTTGTCTCTTCAAGCTTTGTTGAAAAGTATTTCTATTGTTTGTGGTGGGGCTTGCAAAACCTGAGTTCATATGGACAGAATTTGGAAACAACCACTTTCATTGGTGAGACACTGTTCGCTGTGCTTATAGCCATCTTAGGCCTTGTATTATTTGCCCATCTGATTGGGAATATGCAGACGTATCTGCAATCCCTCACTGTGAGGCTTGAAGAATGGAGATTAAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGTCAACTCCCTGAAGACTTGAAGCGACGTGTTCGACGTTTTGTACAATATAAGTGGGTGGCAACTCGAGGAGTTGATGAAGAAGCCATCTTGCAAAGCTTACCGGCCGATCTTCGACGTGATATTCAGTGCCACCTCTGTCTAGATCTTGTCCGACGAGTCCCTTTCTTCTCACAGATGGATGATCAGCTACTAGATGCAATATGTGAACGCCTGATATCGTCATTGAGCACTGAGGGTACCTATATTGTACGAGAGGGTGACCCAGTAACCGAGATGCTGTTCGTTATCCGAGGCAGATTGGAGAGTTCTACTACAAATGGAGGTCGCTCTGGTTTCTTCAACTCCATAACGTTGCGTCCTGGAGACTTTTGTGGGGAGGAACTACTTTCTTGGGCGTTGCACCCAAAATCCACCACCAACTTGCCCTCCTCAACTAGAACAGTCAGAGCGCTCAATGAAGTCGAAGCTTTTGCACTCCGCGCCGAAGATCTTAAATTTGTGGCCAACCAATTTAGACGTCTGCACAGTAAAAAATTGCAGCACACGTTCCGCTTTTACTCTCATCATTGGAGAACATGGGCAGCTTGCTTTATTCAAGCTGCTTGGCGTCGCCATAAGAAAAGAATGATGGCAAAAGATCTCTTAATGAGGGAATCGTTTATATTATCTGAAGAAGTGGCTAGTGAAACTGGCCAAGGAGGAGGGGAACAATTTTGTGTTGTTTCAAATCCTTCTCAGACAAAAATGAATCTGGATGTTACCTTACTGGCTTCAAGGTTTGCTGCAAACGCAAGGAGAGGCGCTCAGAAAATGAAAGATGACATGCCAAAGCTGCAGAAGCCTGATGAACCCGACTTTTCCATTGAGCCAGATAGATAA 2193 42.54 MGMELRKEKLVRFYSDHKKHKKSSIGNNNEAGQLEKSSSKYYIPSSTFLIPDNGLGASKSKSAETFRTEKSKVFPEDHEPWSRRILDPGRKIVLKWNRVFICSCLLALFVDPLYLYLPSLAGNGKSSCVRTDWKLRIVVTCFRTVADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDSKMIAKRYLRSDFFVDLIATLPLPQIVIWFIIPATRSRLTDHKNNALALIVLLQYIPRLYLIFPLSSEIIKANGVVTKTAWAGAAYNLLLYMLASHVLGAIWYLLSVDRYTSCWKSLCRKKEYNPLECNPTFFDCDTLNLIDRNTWANSTLVFDKCGPSGIFKYGIFGNAMSKNVVSSSFVEKYFYCLWWGLQNLSSYGQNLETTTFIGETLFAVLIAILGLVLFAHLIGNMQTYLQSLTVRLEEWRLKRRDTEEWMRHRQLPEDLKRRVRRFVQYKWVATRGVDEEAILQSLPADLRRDIQCHLCLDLVRRVPFFSQMDDQLLDAICERLISSLSTEGTYIVREGDPVTEMLFVIRGRLESSTTNGGRSGFFNSITLRPGDFCGEELLSWALHPKSTTNLPSSTRTVRALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKKRMMAKDLLMRESFILSEEVASETGQGGGEQFCVVSNPSQTKMNLDVTLLASRFAANARRGAQKMKDDMPKLQKPDEPDFSIEPDR 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6324982 6331590 + Carg14050-RA Car02g00892 143378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00892 730 ProSiteProfiles cAMP/cGMP binding motif profile. 493 577 IPR000595 -
Car02g00892 730 Pfam Ion transport protein 96 420 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car02g00892 730 Pfam Cyclic nucleotide-binding domain 516 604 IPR000595 -
Car02g00892 730 MobiDBLite consensus disorder prediction 704 730 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01198 Car-Chr1:11081202 Car02g00892 Car-Chr2:6324982 0 dispersed
Car02g00648 Car-Chr2:4882037 Car02g00892 Car-Chr2:6324982 0 dispersed
Car02g00892 Car-Chr2:6324982 Car12g00767 Car-Chr12:7356547 0 dispersed
Car05g00917 Car-Chr5:8888888 Car02g00892 Car-Chr2:6324982 1.40E-158 dispersed
Car13g00932 Car-Chr13:9556231 Car02g00892 Car-Chr2:6324982 1.30E-128 dispersed
Car16g00821 Car-Chr16:5402498 Car02g00892 Car-Chr2:6324982 1.21E-125 dispersed
Car02g00892 Car-Chr2:6324982 Car14g00583 Car-Chr14:3167288 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00892 K05391 - csv:101218643 1363.59