Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00893 ATGTTGATATCAGTCAGAGAAGCTGCTGCAGCTTCTTCTTCGCCCCTTTGCTTCACCCTCTCCACCCAATATCTTACCAATTCTAAGCGCTTTCCAAGGCTTAGACTTTCATTCACCCGAGCGTCCTTCTCTGTTCCTAACAAGCCCCGCGCTACCAAGTCCTGGAACCTTGGCCTCACTTCCAACAGTTCTGAGAGCTCAGTTTTTGATCCCTTGGGAATCCGTCCAGATCTTTCTTCTGAATTAAGTTGTGGGTGGGAAAGTTTTCTTGGCTTTTGGGGGCAAACATTTGACAGTTCTTCAAGCACAAAACGAGATAAAGGTCCCTCAGCACGTGGATTGGCAGCTGCAATCGAGGACAGTTCCATTGACATAGGGGACTTCTTCAAAGGTCCATTGCCAGGAAAATTTCTACAGCTCTTGGGCTATTTAGCATTATCAAGGCTTGGAATCTATATCCCTCTTGGTGGTGTGAACCGAGAGGCTTTTGTTGGGAACTTGGATCAGAACAGCTTATTGAGCACTTTAGATTCATTTTCTGGTGGAGGCATTGGCAGATTAGGGATATGCTCCCTTGGCATTGTTCCCTTCATCAATGCATCAATTGTCTTCCAGCTTCTTACACAAATTTATCCAAAATTGCAAGAACTTCAGAAAAGAGAAGGTGAAGCTGGGCGAAAGAAAATTCTTCAATACACTCGATATGCCTCAGTTGGGTTTGCAATTGTACAAGCAATTGGTCAAGTTCTGTACCTTCGCCCCTATGTTAATGATTTTAGTACAGAGTGGGTGCTTTCTTCTGTTACTTTATTAACACTTGGCTCAGTCATAACAACGTACATTGGGGAACGGATCACAGACCTAAAGCTAGGTAATGGGACATCTCTTTTAATATTCACCAGCATCATCTCCTATCTACCAGCATCCTTTGGAAGAACAGCTGCACAAGCTTTACAGGATGGTAACTATGTTGGATTGGTTGCTATTATAATCTCCTTCTTTCTATTGGTACTTGGAATCGTATATGTTCAGGAAGCAGAAAGGAAAATCCCGCTCAATTATGCTTCAAGATACACAAGCAGCGGTGGAGGGCTTCAGAAATCTGCTTACCTTCCCTTCAAGGTAAATAGTTCTGGTGTAATGCCGATCATTTTTTCAACATCTACATTGTCCCTGCCGGGTACTCTAGCTCGCTTCACGGGTTTATCTGTCCTAAAGAATGCTGCATTTGCTTTAAATCCAGGAGGCTCATTCTATCTTCCAACCAACATCCTTTTGATAGCCTTCTTCAACTATTACTACACATTCCTACAGTTGGATCCCGATGATGTGAGCGAACAATTGAAACGGCAGGGTGCTTCAATTCCCCTTGTCCGTCCGGGCAAAAGTACAGCTTCGTTTCTGAAAGCGGTTCTAAGTCGGATTTCAGTTCTTGGTTCTGCTTTCTTGGCAATCCTTGCTGCTGGTCCTGCGGTGATTGAGCAAACAACACACTTAACAGCATTTCGAGGATTTGCAGGAACCTCTGTTCTCATTCTTGTCGGTTGTGCTACAGACACTGCCAGAAAAGTACAAGCTGAGATAATCTCTCAGAAGTACAAGAACATAGAGTTCTATGACATCGATAGGTATACTCCATGA 1641 43.75 MLISVREAAAASSSPLCFTLSTQYLTNSKRFPRLRLSFTRASFSVPNKPRATKSWNLGLTSNSSESSVFDPLGIRPDLSSELSCGWESFLGFWGQTFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSVITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTLARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDRYTP 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6331566 6335678 - Carg14049-RA Car02g00893 143379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00893 546 Hamap Protein translocase subunit SecY [secY]. 125 537 IPR026593 -
Car02g00893 546 Pfam SecY 189 520 IPR002208 GO:0015031|GO:0016020
Car02g00893 546 ProSitePatterns Protein secY signature 2. 280 297 IPR030659 -
Car02g00893 546 ProSitePatterns Protein secY signature 1. 188 207 IPR030659 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00893 Car-Chr2:6331566 Car19g00038 Car-Chr19:260367 2.43E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00893 K10956 - csv:101222431 967.992